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Report for CCDS46278.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46278.1 Public Homo sapiens 2 PPP1R21 24 110 108 CCDS HistoryNCBI Gene:129285Re-query CCDS DB by CCDS ID:46278.1Re-query CCDS DB by GeneID:129285See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46278.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000294952.13 ENSP00000294952.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000294952.13Link to Ensembl Protein Viewer:ENSP00000294952.8Re-query CCDS DB by Nucleotide ID:ENST00000294952Re-query CCDS DB by Protein ID:ENSP00000294952
Original member Current member NCBI NM_001135629.3 NP_001129101.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001135629.3Link to Protein Sequence:NP_001129101.1Re-query CCDS DB by Nucleotide ID:NM_001135629Re-query CCDS DB by Protein ID:NP_001129101Link to BLAST:NP_001129101.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129101.1 780 Q6ZMI0-1 780 100% 0 0

Chromosomal Locations for CCDS 46278.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 48440954 48441010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48451008 48451076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48454595 48454741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48458126 48458227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48459754 48459918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48460095 48460153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48461138 48461232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48464937 48464989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48465493 48465642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48471087 48471188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48471279 48471367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48474683 48474819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48479924 48480016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48486631 48486758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48491018 48491170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48495679 48495771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48498493 48498735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48505564 48505596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48507269 48507385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48510015 48510113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48511340 48511468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48514715 48514744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2343 nt):
ATGGCCTCGGCTGAGTTGCAGGGGAAGTACCAGAAGCTGGCTCAGGAGTACTCGAAGCTTCGGGCTCAGA
ATCAGGTTCTGAAAAAAGGTGTTGTGGATGAACAAGCAAATTCTGCAGCTTTAAAGGAGCAACTGAAAAT
GAAGGATCAGTCATTGAGAAAACTACAACAGGAAATGGACAGTTTGACATTTCGAAATCTGCAGCTTGCC
AAGAGGGTAGAACTACTTCAAGATGAACTAGCTCTAAGTGAACCACGAGGCAAGAAAAACAAGAAAAGTG
GAGAATCTTCTTCTCAGTTGAGTCAAGAGCAGAAGAGTGTCTTTGATGAAGATCTGCAAAAGAAGATAGA
AGAGAATGAACGGTTGCATATACAATTTTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTG
AGGAGTCGACTGGCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGTCTCACCCGGA
AGTACATGGAAACCATTGAGAAGCTGCAGAACGACAAGGCTAAACTAGAAGTGAAATCTCAGACTCTAGA
AAAGGAAGCCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTCATGAAGAT
TTGTCAGGTAGATTAGAGGAATCCTTATCAATCATCAATGAAAAAGTACCTTTTAATGATACAAAATATA
GTCAGTACAACGCTCTGAACGTTCCACTCCACAATAGGAGACACCAGCTGAAGATGCGAGATATTGCTGG
GCAGGCCCTGGCTTTTGTTCAGGATCTTGTGACGGCTCTTCTAAACTTTCATACCTACACAGAACAGAGG
ATTCAAATTTTTCCTGTTGATTCTGCCATTGACACTATATCTCCATTGAATCAGAAGTTCTCACAATACC
TTCATGAAAATGCGTCCTATGTCCGCCCTCTTGAGGAAGGAATGCTTCATTTATTTGAAAGTATCACTGA
GGATACTGTGACTGTCTTGGAGACAACTGTGAAATTGAAAACTTTTTCAGAACACTTAACCTCCTACATA
TGTTTTCTTAGGAAGATTCTTCCCTATCAGTTAAAAAGTTTAGAAGAAGAATGTGAATCCTCTCTTTGCA
CATCTGCGTTAAGAGCCAGGAATCTAGAGCTGTCCCAGGACATGAAAAAAATGACAGCTGTGTTTGAGAA
GCTGCAGACTTACATAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGGACAAACTAC
AGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATGACGTTATGAAAGATATTTCCAAAC
ATTATAGTCAAAAAGCTGCAATAGAGCATGAACTTCCAACAGCAACACAGAAGCTGATAACAACTAATGA
CTGTATCCTGTCATCAGTAGTGGCATTAACAAATGGAGCAGGAAAGATTGCATCCTTCTTCAGCAACAAT
TTGGACTACTTCATTGCTTCACTGAGCTATGGACCTAAGGCAGCGAGTGGATTCATTAGTCCTCTTTCAG
CTGAATGCATGCTACAGTATAAGAAAAAAGCTGCTGCCTATATGAAGTCTTTGAGAAAGCCCCTCTTGGA
GTCTGTGCCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGC
CTTGCACAGCAAGTTCAACAGAGTTTGGAAAAGATTTCTAAACTGGAGCAGGAAAAAGAACATTGGATGT
TGGAAGCACAATTAGCCAAAATCAAGCTAGAGAAAGAAAACCAGCGAATTGCAGATAAGCTGAAGAATAC
AGGTAGTGCCCAGCTGGTTGGGCTGGCCCAGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAGGATGAA
GCCACAGCTAAGGCTGTGTTGGAGCCCATTCAGAGCACCAGTCTAATTGGGACTTTAACCAGGACATCTG
ACAGTGAGGTTCCAGATGTGGAATCTCGTGAAGACTTAATTAAAAATCACTACATGGCAAGGATAGTGGA
ACTTACGTCTCAGTTGCAGCTGGCTGACAGTAAGTCAGTGCATTTTTATGCCGAGTGCCGAGCACTGTCT
AAAAGACTGGCCTTGGCTGAAAAGTCTAAGGAAGCATTGACAGAAGAAATGAAACTTGCCAGTCAGAACA
TCAGCAGACTTCAGGATGAGCTGACAACTACCAAGAGGAGTTACGAGGATCAGTTAAGTATGATGAGTGA
CCACCTGTGCAGCATGAATGAGACATTATCTAAACAGAGAGAAGAGATTGACACACTAAAGATGTCCAGT
AAGGGGAATTCTAAAAAGAACAAGAGTCGATAG

Translation (780 aa):
MASAELQGKYQKLAQEYSKLRAQNQVLKKGVVDEQANSAALKEQLKMKDQSLRKLQQEMDSLTFRNLQLA
KRVELLQDELALSEPRGKKNKKSGESSSQLSQEQKSVFDEDLQKKIEENERLHIQFFEADEQHKHVEAEL
RSRLATLETEAAQHQAVVDGLTRKYMETIEKLQNDKAKLEVKSQTLEKEAKECRLRTEECQLQLKTLHED
LSGRLEESLSIINEKVPFNDTKYSQYNALNVPLHNRRHQLKMRDIAGQALAFVQDLVTALLNFHTYTEQR
IQIFPVDSAIDTISPLNQKFSQYLHENASYVRPLEEGMLHLFESITEDTVTVLETTVKLKTFSEHLTSYI
CFLRKILPYQLKSLEEECESSLCTSALRARNLELSQDMKKMTAVFEKLQTYIALLALPSTEPDGLLRTNY
SSVLTNVGAALHGFHDVMKDISKHYSQKAAIEHELPTATQKLITTNDCILSSVVALTNGAGKIASFFSNN
LDYFIASLSYGPKAASGFISPLSAECMLQYKKKAAAYMKSLRKPLLESVPYEEALANRRILLSSTESREG
LAQQVQQSLEKISKLEQEKEHWMLEAQLAKIKLEKENQRIADKLKNTGSAQLVGLAQENAAVSNTAGQDE
ATAKAVLEPIQSTSLIGTLTRTSDSEVPDVESREDLIKNHYMARIVELTSQLQLADSKSVHFYAECRALS
KRLALAEKSKEALTEEMKLASQNISRLQDELTTTKRSYEDQLSMMSDHLCSMNETLSKQREEIDTLKMSS
KGNSKKNKSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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