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Report for CCDS46311.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46311.1 Public Homo sapiens 2 CNRIP1 24 110 108 CCDS HistoryNCBI Gene:25927Re-query CCDS DB by CCDS ID:46311.1Re-query CCDS DB by GeneID:25927See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46311.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409559.7 ENSP00000386883.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409559.7Link to Ensembl Protein Viewer:ENSP00000386883.3Re-query CCDS DB by Nucleotide ID:ENST00000409559Re-query CCDS DB by Protein ID:ENSP00000386883
Original member Current member NCBI NM_001111101.2 NP_001104571.1 Accepted alive Link to Nucleotide Sequence:NM_001111101.2Link to Protein Sequence:NP_001104571.1Re-query CCDS DB by Nucleotide ID:NM_001111101Re-query CCDS DB by Protein ID:NP_001104571Link to BLAST:NP_001104571.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001104571.1 128 Q96F85-2 128 100% 0 0

Chromosomal Locations for CCDS 46311.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 68284428 68284484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 68317157 68317307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 68319222 68319400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (387 nt):
ATGGGGGACCTGCCGGGCCTCGTGCGCCTCTCCATCGCGCTGCGCATCCAGCCTAATGACGGCCCGGTCT
TTTACAAGGTGGACGGGCAGCGCTTCGGCCAGAACCGCACCATCAAGCTGCTCACCGGCTCCTCCTACAA
GGTTGAGGTGAAGATTAAACCCAGCACGCTGCAGGTCGAGAATATTTCCATTGGTGGTGTGCTTGTCCCA
CTGGAACTGAAGTCTAAAGAGCCTGATGGGGACAGAGTTGTTTATACGGGTACATATGACACAGAAGGTG
TGACCCCAACGAAGAGTGGAGAACGGCAACCCATCCAGATCACCATGCCGGAGTGCCTGGAACAACGACC
CCAAGAGATCTCTCTTACATATGAATGTGAAGAATAA

Translation (128 aa):
MGDLPGLVRLSIALRIQPNDGPVFYKVDGQRFGQNRTIKLLTGSSYKVEVKIKPSTLQVENISIGGVLVP
LELKSKEPDGDRVVYTGTYDTEGVTPTKSGERQPIQITMPECLEQRPQEISLTYECEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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