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Report for CCDS46333.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46333.1 Public Homo sapiens 2 EXOC6B 24 110 108 CCDS HistoryNCBI Gene:23233Re-query CCDS DB by CCDS ID:46333.1Re-query CCDS DB by GeneID:23233See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46333.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000272427.11 ENSP00000272427.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000272427.11Link to Ensembl Protein Viewer:ENSP00000272427.7Re-query CCDS DB by Nucleotide ID:ENST00000272427Re-query CCDS DB by Protein ID:ENSP00000272427
Original member Current member NCBI NM_015189.3 NP_056004.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015189.3Link to Protein Sequence:NP_056004.1Re-query CCDS DB by Nucleotide ID:NM_015189Re-query CCDS DB by Protein ID:NP_056004Link to BLAST:NP_056004.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056004.1 811 Q9Y2D4-1 811 100% 0 0

Chromosomal Locations for CCDS 46333.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 72179335 72179461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72184075 72184187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72334947 72335020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72379729 72379870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72465160 72465339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72480616 72480750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72492318 72492429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72495430 72495539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72496454 72496559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72498454 72498551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72499901 72499972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72513132 72513252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72514634 72514680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72515043 72515126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72559453 72559521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72575492 72575668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72718103 72718307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72731007 72731052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72731155 72731245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72733071 72733118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72741304 72741469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72825798 72825910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2436 nt):
ATGGAGCGGGGTAAGATGGCGGAGGCGGAGAGCCTGGAGACAGCGGCAGAGCACGAGCGGATCCTGCGAG
AGATCGAGAGCACTGACACGGCCTGCATCGGGCCCACGCTCAGGTCTGTTTATGATGGTGAAGAACATGG
ACGTTTCATGGAGAAGCTTGAAACTCGTATCCGTAATCACGACCGAGAAATTGAGAAAATGTGCAACTTT
CATTACCAGGGCTTTGTGGACTCTATAACTGAACTGCTGAAAGTGAGAGGAGAAGCCCAGAAACTCAAAA
ATCAAGTGACGGATACTAATAGAAAACTACAACATGAGGGAAAGGAACTGGTAATAGCAATGGAAGAGCT
GAAGCAGTGTCGACTACAACAGAGAAATATTTCTGCCACTGTTGATAAATTAATGCTGTGTCTTCCAGTC
CTAGAGATGTACAGCAAACTGAGGGACCAGATGAAAACTAAAAGGCATTATCCTGCACTGAAAACTCTGG
AACATCTAGAGCATACCTACCTGCCTCAAGTAAGCCACTATCGATTCTGCAAGGTGATGGTGGACAACAT
CCCCAAGCTTCGAGAAGAAATAAAAGATGTTTCTATGTCCGATCTCAAAGACTTTCTGGAGAGCATCCGC
AAACATTCAGACAAAATTGGAGAGACTGCCATGAAGCAAGCCCAGCAGCAAAGAAACCTGGATAACATCG
TCTTGCAACAACCCAGAATAGGTAGCAAGAGGAAATCTAAGAAAGATGCATATATAATCTTTGATACAGA
GATAGAAAGTACTAGTCCGAAGTCTGAACAGGATTCAGGAATTCTGGATGTTGAAGACGAGGAAGATGAT
GAAGAGGTACCTGGGGCCCAAGATTTGGTGGATTTCTCTCCAGTTTATCGATGTCTACATATATATTCTG
TCCTGGGTGCCCGGGAAACATTTGAGAATTACTACCGAAAACAGAGGCGAAAACAGGCTCGTTTGGTACT
TCAACCTCCATCTAACATGCATGAAACTTTAGATGGCTACAGGAAGTATTTTAATCAAATTGTAGGCTTT
TTTGTGGTTGAAGATCACATTTTACATACAACCCAGGGCTTAGTAAATAGAGCCTACATTGATGAACTGT
GGGAAATGGCACTTTCAAAAACCATCGCAGCACTCCGTACCCACTCGTCTTACTGTTCTGATCCAAACCT
TGTGTTAGATTTGAAGAACCTCATTGTGCTTTTTGCTGACACACTTCAGGTGTATGGTTTCCCTGTAAAT
CAGCTTTTTGACATGCTGTTAGAAATCAGAGACCAATATAGTGAAACTCTGCTAAAGAAGTGGGCAGGTA
TTTTCAGAAACATACTTGATTCTGACAACTACAGTCCTATACCAGTAACAAGTGAAGAGATGTACAAAAA
GGTGGTAGGACAATTCCCATTTCAAGATATAGAACTGGAAAAGCAACCATTTCCAAAAAAGTTTCCTTTC
TCTGAATTTGTGCCAAAAGTTTACAACCAAATTAAAGAATTTATCTACGCTTGTCTGAAGTTTTCAGAAG
ATCTTCATCTAAGCTCAACTGAAGTTGATGACATGATTCGGAAATCAACAAACCTGTTGCTAACCAGGAC
TCTGAGCAACTCTCTGCAGAATGTAATTAAAAGGAAGAATATTGGGCTTACTGAGCTTGTTCAGATTATT
ATCAATACAACACATTTGGAGAAATCCTGTAAGTACTTGGAAGAATTTATCACCAACATCACTAATGTGC
TTCCAGAGACAGTTCACACTACCAAGCTCTATGGCACCACAACTTTTAAGGATGCTAGACATGCAGCTGA
AGAAGAGATTTATACCAACTTAAACCAGAAGATTGACCAGTTCCTACAGCTGGCAGACTATGACTGGATG
ACCGGAGATTTGGGCAACAAAGCTAGTGATTACCTGGTAGACCTCATTGCCTTTCTTCGTAGCACCTTTG
CTGTATTCACACACCTTCCTGGAAAGGTGGCCCAGACAGCGTGTATGTCAGCTTGCAAGCATTTAGCCAC
ATCCTTGATGCAACTTTTGTTGGAAGCTGAAGTGCGGCAGCTCACCTTGGGAGCATTACAGCAGTTCAAC
TTGGACGTCAGAGAATGTGAACAGTTTGCCAGATCCGGCCCGGTGCCTGGGTTCCAGGAGGACACGCTGC
AGTTGGCCTTCATCGACTTGAGACAACTTTTGGATCTTTTCATCCAGTGGGATTGGTCAACCTACCTTGC
TGACTATGGTCAGCCCAACTGCAAGTACCTCCGGGTAAACCCAGTGACTGCTCTGACCCTGCTTGAGAAG
ATGAAGGATACTAGCCGCAAGAACAACATGTTTGCACAGTTTCGGAAAAATGAGCGAGACAAGCAGAAAC
TCATTGACACCGTGGCCAAGCAGCTCCGAGGACTCATCAGCAGCCACCACTCATGA

Translation (811 aa):
MERGKMAEAESLETAAEHERILREIESTDTACIGPTLRSVYDGEEHGRFMEKLETRIRNHDREIEKMCNF
HYQGFVDSITELLKVRGEAQKLKNQVTDTNRKLQHEGKELVIAMEELKQCRLQQRNISATVDKLMLCLPV
LEMYSKLRDQMKTKRHYPALKTLEHLEHTYLPQVSHYRFCKVMVDNIPKLREEIKDVSMSDLKDFLESIR
KHSDKIGETAMKQAQQQRNLDNIVLQQPRIGSKRKSKKDAYIIFDTEIESTSPKSEQDSGILDVEDEEDD
EEVPGAQDLVDFSPVYRCLHIYSVLGARETFENYYRKQRRKQARLVLQPPSNMHETLDGYRKYFNQIVGF
FVVEDHILHTTQGLVNRAYIDELWEMALSKTIAALRTHSSYCSDPNLVLDLKNLIVLFADTLQVYGFPVN
QLFDMLLEIRDQYSETLLKKWAGIFRNILDSDNYSPIPVTSEEMYKKVVGQFPFQDIELEKQPFPKKFPF
SEFVPKVYNQIKEFIYACLKFSEDLHLSSTEVDDMIRKSTNLLLTRTLSNSLQNVIKRKNIGLTELVQII
INTTHLEKSCKYLEEFITNITNVLPETVHTTKLYGTTTFKDARHAAEEEIYTNLNQKIDQFLQLADYDWM
TGDLGNKASDYLVDLIAFLRSTFAVFTHLPGKVAQTACMSACKHLATSLMQLLLEAEVRQLTLGALQQFN
LDVRECEQFARSGPVPGFQEDTLQLAFIDLRQLLDLFIQWDWSTYLADYGQPNCKYLRVNPVTALTLLEK
MKDTSRKNNMFAQFRKNERDKQKLIDTVAKQLRGLISSHHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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