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Report for CCDS46422.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46422.1 Public Homo sapiens 2 EPC2 24 110 108 CCDS HistoryNCBI Gene:26122Re-query CCDS DB by CCDS ID:46422.1Re-query CCDS DB by GeneID:26122See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46422.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000258484.11 ENSP00000258484.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000258484.11Link to Ensembl Protein Viewer:ENSP00000258484.6Re-query CCDS DB by Nucleotide ID:ENST00000258484Re-query CCDS DB by Protein ID:ENSP00000258484
Original member Current member NCBI NM_015630.4 NP_056445.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015630.4Link to Protein Sequence:NP_056445.3Re-query CCDS DB by Nucleotide ID:NM_015630Re-query CCDS DB by Protein ID:NP_056445Link to BLAST:NP_056445.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056445.3 807 Q52LR7 807 100% 0 0

Chromosomal Locations for CCDS 46422.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 148645018 148645170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 148690214 148690373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 148743622 148743767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 148753927 148754133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 148761782 148761930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 148762670 148762802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 148764955 148765146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 148769151 148769240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 148770792 148770937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 148771044 148771387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 148781644 148781780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 148783597 148783756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 148784668 148785001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 148786305 148786377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2424 nt):
ATGAGTAAACTCTCCTTCCGAGCGCGGGCGCTGGACGCCGCCAAGCCGCTGCCTATCTACCGCGGCAAGG
ACATGCCTGATCTCAACGACTGCGTCTCCATCAACCGGGCCGTGCCCCAGATGCCCACCGGGATGGAGAA
GGAGGAGGAATCGGAACATCATTTACAGCGAGCAATTTCAGCACAGCAAGTGTTTAGAGAAAAAAAAGAG
AGTATGGTCATTCCTGTTCCTGAGGCAGAGAGCAACGTCAACTATTACAATCGCTTGTACAAAGGAGAGT
TTAAACAGCCAAAACAGTTCATTCATATTCAGCCTTTTAATCTAGACAACGAGCAACCAGATTATGATAT
GGATTCAGAAGATGAGACTTTATTAAATAGACTTAACAGAAAGATGGAAATTAAGCCTTTGCAATTTGAA
ATTATGATTGACAGACTTGAAAAAGCCAGTTCTAATCAGCTTGTAACACTTCAAGAAGCAAAACTGCTGC
TAAACGAAGATGATTACCTTATTAAAGCTGTATATGACTACTGGGTGAGAAAACGTAAAAACTGCAGGGG
GCCATCCCTCATTCCTCAGATAAAACAAGAGAAAAGAGATGGCTCTACCAACAATGACCCTTATGTTGCC
TTTCGGAGAAGAACAGAGAAAATGCAAACTCGAAAGAATCGTAAGAATGATGAAGCCTCTTATGAAAAGA
TGTTGAAACTGAGACGAGAATTTAGTAGAGCCATAACAATTTTGGAAATGATTAAGAGAAGAGAGAAAAC
AAAACGAGAATTATTGCACTTAACCTTAGAAGTTGTGGAGAAAAGATACCATTTGGGAGACTATGGTGGT
GAAATCCTTAATGAAGTAAAAATCAGTAGATCAGAAAAAGAGTTATATGCCACTCCAGCAACTCTTCATA
ATGGAAATCATCACAAAGTTCAAGAATGTAAAACTAAGCACCCTCATCATTTGTCTTTGAAAGAAGAGGC
TTCTGATGTGGTTCGTCAAAAGAAGAAGTACCCAAAGAAGCCTAAAGCAGAGGCTTTGATAACATCTCAG
CAACCCACTCCTGAGACATTGCCTGTGATCAATAAGAGTGACATTAAGCAATATGATTTTCACAGCTCAG
ATGAAGATGAATTTCCACAGGTATTGTCCCCAGTATCAGAACCGGAAGAAGAAAATGATCCTGATGGTCC
CTGTGCTTTCAGAAGGCGGGCAGGATGCCAGTATTATGCTCCTCGTTTGGACCAAGCTAACCATTCATGT
GAAAATTCAGAATTGGCAGATTTGGATAAGTTGAGGTATAGGCATTGCCTTACAACACTTACAGTCCCAA
GAAGATGTATAGGATTTGCAAGGAGGCGAATTGGCAGAGGTGGAAGGGTCATAATGGACCGAATATCCAC
AGAACATGACCCAGTCCTGAAACAGATAGACCCTGAAATGCTGAATAGTTTTTCAAGCTCTTCCCAAACT
ATAGACTTTTCTTCTAATTTCTCTCGGACCAATGCTTCCAGTAAACATTGTGAAAATAGACTGTCTCTTT
CTGAAATATTAAGCAATATCAGATCATGTCGACTACAGTGTTTCCAGCCAAGGCTACTAAATTTACAGGA
CAGTGATAGTGAAGAATGTACCTCAAGAAAACCAGGGCAGACTGTGAACAATAAAAGAGTTTCTGCAGCA
TCTGTAGCTTTATTGAACACCAGCAAGAATGGCATATCAGTAACAGGGGGTATCACAGAAGAGCAGTTTC
AGACACATCAGCAGCAGTTAGTTCAGATGCAAAGGCAGCAACTTGCCCAGCTTCAGCAGAAACAGCAATC
TCAGCATTCCTCGCAACAGACACATCCAAAAGCACAGGGCTCAAGCACCTCTGACTGTATGTCTAAAACA
CTTGACTCAGCCAGCGCCCACTTTGCTGCATCTGCAGTGGTCAGTGCACCTGTTCCAAGTCGCAGTGAGG
TAGCCAAGGAACAGAACACTGGCCACAACAACATAAACGGTGTTGTCCAGCCTTCAGGAACCTCTAAAAC
ATTATACTCCACCAATATGGCTTTATCATCCAGCCCAGGGATTTCAGCTGTACAGCTTGTAAGGACAGTT
GGCCACACCACTACAAACCACTTAATCCCAGCATTGTGCACAAGCAGTCCTCAGACACTTCCCATGAACA
ATTCCTGCCTGACAAATGCAGTGCACCTCAATAATGTCAGTGTTGTTTCTCCAGTCAATGTGCATATCAA
TACACGGACTTCAGCACCATCGCCAACAGCCTTAAAACTTGCCACAGTTGCTGCCAGTATGGACAGAGTG
CCAAAGGTTACTCCCAGCAGTGCCATCAGCAGCATAGCAAGAGAGAACCACGAACCAGAAAGATTGGGCT
TAAATGGAATAGCAGAGACAACAGTAGCTATGGAAGTGACATAA

Translation (807 aa):
MSKLSFRARALDAAKPLPIYRGKDMPDLNDCVSINRAVPQMPTGMEKEEESEHHLQRAISAQQVFREKKE
SMVIPVPEAESNVNYYNRLYKGEFKQPKQFIHIQPFNLDNEQPDYDMDSEDETLLNRLNRKMEIKPLQFE
IMIDRLEKASSNQLVTLQEAKLLLNEDDYLIKAVYDYWVRKRKNCRGPSLIPQIKQEKRDGSTNNDPYVA
FRRRTEKMQTRKNRKNDEASYEKMLKLRREFSRAITILEMIKRREKTKRELLHLTLEVVEKRYHLGDYGG
EILNEVKISRSEKELYATPATLHNGNHHKVQECKTKHPHHLSLKEEASDVVRQKKKYPKKPKAEALITSQ
QPTPETLPVINKSDIKQYDFHSSDEDEFPQVLSPVSEPEEENDPDGPCAFRRRAGCQYYAPRLDQANHSC
ENSELADLDKLRYRHCLTTLTVPRRCIGFARRRIGRGGRVIMDRISTEHDPVLKQIDPEMLNSFSSSSQT
IDFSSNFSRTNASSKHCENRLSLSEILSNIRSCRLQCFQPRLLNLQDSDSEECTSRKPGQTVNNKRVSAA
SVALLNTSKNGISVTGGITEEQFQTHQQQLVQMQRQQLAQLQQKQQSQHSSQQTHPKAQGSSTSDCMSKT
LDSASAHFAASAVVSAPVPSRSEVAKEQNTGHNNINGVVQPSGTSKTLYSTNMALSSSPGISAVQLVRTV
GHTTTNHLIPALCTSSPQTLPMNNSCLTNAVHLNNVSVVSPVNVHINTRTSAPSPTALKLATVAASMDRV
PKVTPSSAISSIARENHEPERLGLNGIAETTVAMEVT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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