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Report for CCDS46467.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46467.1 Public Homo sapiens 2 ITPRID2 24 110 108 CCDS HistoryNCBI Gene:6744Re-query CCDS DB by CCDS ID:46467.1Re-query CCDS DB by GeneID:6744See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46467.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000431877.7 ENSP00000388731.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000431877.7Link to Ensembl Protein Viewer:ENSP00000388731.2Re-query CCDS DB by Nucleotide ID:ENST00000431877Re-query CCDS DB by Protein ID:ENSP00000388731
Original member Current member NCBI NM_001130445.3 NP_001123917.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001130445.3Link to Protein Sequence:NP_001123917.1Re-query CCDS DB by Nucleotide ID:NM_001130445Re-query CCDS DB by Protein ID:NP_001123917Link to BLAST:NP_001123917.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123917.1 1259 P28290-1 1259 100% 0 0

Chromosomal Locations for CCDS 46467.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 181892067 181892277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181892615 181892660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181896030 181896079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181896908 181896964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181898880 181898919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181899014 181899112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181900696 181900904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181901766 181902466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181909899 181909971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181913845 181913933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181915216 181916427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181918598 181918675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181918755 181918882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181919296 181919446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181920597 181920662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181921948 181922412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181928161 181928265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3780 nt):
ATGGACCGGCCCCTGTCGTCGTCGGCGGAGGCGGAGGAGGAACTGGAGTGGCAAGTGGCGAGTCGCAGGA
GGAAGGCCTGGGCCAAGTGCCGCAGCTCCTGGCAAGCGTCGGAGACGGAGGATCTGTCCACAGAAGCGAC
GACGCAGGACGAGGAGGAGGACGAGGAGGAGGACCTCCCCGGCGCGCAGCTGCCGGCAGCGGGGGGAAGA
GGAAACGTGCCCAACGAGAAGATCGCGATATGGCTCAAGGACTGCCGTACACCTTTGGGAGCCTCACTGG
ATGAACAAAGCAGTAGTACACTCAAGGGTGTGCTTGTGAGAAATGGAGGAAGTTTTGAAGATGATTTGTC
ATTGGGAGCTGAAGCCAACCACCTCCATGAAAGTGATGCTCAAATTGAAAACTGCAATAATATCTTGGCC
AAAGAGAGAAGATTACAGTTTCATCAGAAAGGGAGAAGTATGAATTCCACTGGATCTGGGAAAAGTAGTG
GGACAGTTTCAAGTGTTTCAGAATTGTTGGAACTTTATGAGGAAGATCCTGAAGAAATTCTTTATAATCT
TGGATTTGGACGTGATGAACCAGATATTGCTTCTAAAATTCCTTCCAGATTTTTTAATTCATCATCCTTT
GCCAAAGGGATAGATATTAAAGTATTTTTGAGTGCTCAGATGCAACGGATGGAAGTAGAAAACCCAAATT
ATGCTTTAACAAGCCGTTTTCGTCAAATTGAAGTGCTTACTACTGTGGCCAATGCGTTTTCTTCTTTATA
TTCTCAAGTCTCCGGGACGCCCCTGCAGAGAATTGGAAGTATGTCCTCAGTGACCTCTAACAAGGAGACA
GACCCACCTCCACCTTTAACTCGAAGTAACACTGCAAATCGTTTAATGAAAACACTCTCAAAACTGAATT
TATGTGTTGATAAAACAGAGAAAGGAGAAAGTAGTAGTCCTTCTCCATCAGCTGAAAAAGGAAAGATTCT
AAATGTTTCAGTGATTGAAGAAAGTGGCAATAAAAACGATCAAAAGTCTCAAAAAATTATGAAGAAGAAA
GAGTCATCTTCTATGTTGGCTACAGTTAAAGAAGAAGTCTCTGGTAGTTCAGCAGCTGTTACGGAGAATG
CTGATAGTGATAGAATTTCTGATGAAGCAAATAGTAATTTTAACCAAGGAACTGAAAATGAACAAAGTAA
AGAAACTCAAAGTCATGAGAGTAAACTGGGTGAGGAATCTGGTATTGTAGAATCCAAATTAGATAGTGAT
TTCAACATATCCAGCCACAGTGAGCTGGAAAATAGCAGTGAGCTGAAAAGTGTCCATATATCCACACCTG
AAAAAGAGCCTTGTGCACCACTGACAATACCATCCATAAGAAATATAATGACACAGCAGAAGGACTCCTT
CGAAATGGAAGAGGTTCAAAGTACGGAGGGAGAAGCTCCTCATGTTCCAGCCACTTACCAGCTAGGTCTT
ACGAAGTCGAAAAGAGATCATCTGTTACGTACTGCAAGTCAGCATTCCGATAGCAGTGGTTTTGCTGAAG
ATTCTACAGACTGCCTATCCCTTAATCATCTTCAGGTTCAGGAGTCCTTGCAGGCTATGGGGAGTAGTGC
TGATAGTTGTGACAGTGAGACAACAGTTACGTCACTTGGTGAAGACCTTGCCACACCAACAGCACAAGAC
CAGCCTTATTTTAATGAATCAGAGGAGGAGTCTCTTGTCCCTCTTCAGAAGGGACTAGAGAAGGCAGCAG
CAGTTGCAGACAAAAGAAAATCAGGTAGCCAGGATTTCCCTCAGTGCAACACCATTGAGAATACAGGAAC
TAAACAGTCCACCTGTAGTCCAGGGGATCATATCATTGAAATTACTGAAGTGGAAGAGGATTTGTTTCCA
GCAGAGACAGTAGAGCTACTGAGGGAAGCAAGTGCTGAAAGTGATGTGGGTAAAAGCAGTGAAAGTGAAT
TTACTCAGTATACCACACACCATATTCTGAAATCATTGGCTTCTATTGAAGCTAAATGCAGTGATATGAG
CTCTGAAAATACAACTGGGCCTCCCTCTTCCATGGACAGAGTTAATACAGCTTTGCAAAGAGCTCAAATG
AAGGTTTGCAGTCTGTCTAATCAAAGGATGGGGCGTAGCCTGCTAAAATCAAAAGATTTGTTAAAACAAA
GGTACTTATTTGCAAAAGCTGGCTATCCTCTAAGAAGGTCTCAGTCTTTACCAACCACCTTATTGAGCCC
AGTAAGGGTTGTGTCCTCTGTCAATGTTCGATTATCTCCAGGAAAAGAGACCAGATGCAGCCCACCTTCC
TTCACCTATAAGTACACACCTGAAGAGGAGCAGGAATTGGAAAAGCGGGTGATGGAACATGATGGTCAGT
CTTTAGTTAAATCGACCATTTTCATCTCTCCATCATCTGTGAAGAAAGAAGAAGCCCCCCAGAGTGAGGC
GCCGCGGGTGGAGGAATGCCATCATGGAAGGACTCCTACCTGTTCACGGCTTGCTCCACCACCAATGTCT
CAGTCTACCTGTTCCCTTCATTCCATCCACTCTGAGTGGCAAGAAAGGCCCCTGTGTGAGCACACAAGAA
CTCTGAGCACTCACAGTGTTCCCAACATATCAGGGGCTACTTGTAGTGCCTTCGCTTCCCCTTTCGGGTG
TCCTTACTCACATAGACATGCCACCTACCCTTACCGAGTGTGCTCTGTGAATCCTCCTTCAGCCATAGAA
ATGCAGTTGCGAAGAGTATTACATGATATTAGAAACTCACTGCAGAATCTTTCACAGTACCCTATGATGA
GAGGACCTGATCCTGCTGCTGCTCCATATAGTACTCAGAAATCATCTGTTCTACCTCTTTATGAAAATAC
TTTTCAGGAGCTCCAGGTAATGAGGCGGAGCCTGAATTTGTTTAGAACACAAATGATGGATTTAGAATTG
GCAATGCTGCGTCAGCAAACCATGGTTTATCATCATATGACTGAGGAGGAGAGGTTTGAAGTTGATCAGC
TCCAGGGTTTGAGAAATTCAGTCCGAATGGAACTTCAGGACCTGGAACTGCAGCTGGAGGAGCGCCTGCT
GGGCCTGGAGGAGCAGCTTCGTGCTGTGCGCATGCCTTCACCCTTCCGCTCCTCCGCACTCATGGGAATG
TGTGGCAGTAGAAGCGCTGATAACTTGTCATGCCCTTCTCCATTGAATGTAATGGAACCAGTCACTGAAC
TGATGCAGGAGCAGTCATACCTGAAGTCTGAATTGGGCCTGGGACTTGGAGAAATGGGATTTGAAATTCC
TCCTGGAGAAAGCTCAGAATCTGTTTTTTCCCAAGCAACATCAGAATCATCTTCTGTATGTTCTGGTCCC
TCTCATGCTAACAGAAGAACTGGAGTACCTTCTACTGCCTCAGTGGGCAAATCCAAAACCCCATTAGTGG
CAAGGAAGAAAGTGTTCCGAGCATCGGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTGTGCA
GACACCTCCAGATTTGGAAAGTTCTGAGGAAGTTGATGCAGCTGAAGGAGCCCCAGAAGTTGTAGGACCT
AAATCTGAAGTGGAAGAAGGGCATGGAAAACTCCCATCAATGCCAGCTGCTGAGGAAATGCATAAAAATG
TGGAGCAAGATGAGTTGCAGCAAGTCATACGGGAGATTAAAGAGTCTATTGTTGGGGAAATCAGACGGGA
AATTGTAAGTGGACTTTTGGCAGCAGTATCTTCAAGTAAAGCGTCTAATTCTAAGCAAGATTATCATTAA

Translation (1259 aa):
MDRPLSSSAEAEEELEWQVASRRRKAWAKCRSSWQASETEDLSTEATTQDEEEDEEEDLPGAQLPAAGGR
GNVPNEKIAIWLKDCRTPLGASLDEQSSSTLKGVLVRNGGSFEDDLSLGAEANHLHESDAQIENCNNILA
KERRLQFHQKGRSMNSTGSGKSSGTVSSVSELLELYEEDPEEILYNLGFGRDEPDIASKIPSRFFNSSSF
AKGIDIKVFLSAQMQRMEVENPNYALTSRFRQIEVLTTVANAFSSLYSQVSGTPLQRIGSMSSVTSNKET
DPPPPLTRSNTANRLMKTLSKLNLCVDKTEKGESSSPSPSAEKGKILNVSVIEESGNKNDQKSQKIMKKK
ESSSMLATVKEEVSGSSAAVTENADSDRISDEANSNFNQGTENEQSKETQSHESKLGEESGIVESKLDSD
FNISSHSELENSSELKSVHISTPEKEPCAPLTIPSIRNIMTQQKDSFEMEEVQSTEGEAPHVPATYQLGL
TKSKRDHLLRTASQHSDSSGFAEDSTDCLSLNHLQVQESLQAMGSSADSCDSETTVTSLGEDLATPTAQD
QPYFNESEEESLVPLQKGLEKAAAVADKRKSGSQDFPQCNTIENTGTKQSTCSPGDHIIEITEVEEDLFP
AETVELLREASAESDVGKSSESEFTQYTTHHILKSLASIEAKCSDMSSENTTGPPSSMDRVNTALQRAQM
KVCSLSNQRMGRSLLKSKDLLKQRYLFAKAGYPLRRSQSLPTTLLSPVRVVSSVNVRLSPGKETRCSPPS
FTYKYTPEEEQELEKRVMEHDGQSLVKSTIFISPSSVKKEEAPQSEAPRVEECHHGRTPTCSRLAPPPMS
QSTCSLHSIHSEWQERPLCEHTRTLSTHSVPNISGATCSAFASPFGCPYSHRHATYPYRVCSVNPPSAIE
MQLRRVLHDIRNSLQNLSQYPMMRGPDPAAAPYSTQKSSVLPLYENTFQELQVMRRSLNLFRTQMMDLEL
AMLRQQTMVYHHMTEEERFEVDQLQGLRNSVRMELQDLELQLEERLLGLEEQLRAVRMPSPFRSSALMGM
CGSRSADNLSCPSPLNVMEPVTELMQEQSYLKSELGLGLGEMGFEIPPGESSESVFSQATSESSSVCSGP
SHANRRTGVPSTASVGKSKTPLVARKKVFRASVALTPTAPSRTGSVQTPPDLESSEEVDAAEGAPEVVGP
KSEVEEGHGKLPSMPAAEEMHKNVEQDELQQVIREIKESIVGEIRREIVSGLLAAVSSSKASNSKQDYH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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