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Report for CCDS46501.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46501.1 Public Homo sapiens 2 ZDBF2 24 110 108 CCDS HistoryNCBI Gene:57683Re-query CCDS DB by CCDS ID:46501.1Re-query CCDS DB by GeneID:57683See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46501.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374423.9 ENSP00000363545.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374423.9Link to Ensembl Protein Viewer:ENSP00000363545.3Re-query CCDS DB by Nucleotide ID:ENST00000374423Re-query CCDS DB by Protein ID:ENSP00000363545
Original member Current member EBI ENST00000649650.1 ENSP00000497308.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649650.1Link to Ensembl Protein Viewer:ENSP00000497308.1Re-query CCDS DB by Nucleotide ID:ENST00000649650Re-query CCDS DB by Protein ID:ENSP00000497308
Original member Current member NCBI NM_001369654.1 NP_001356583.1 Accepted alive Link to Nucleotide Sequence:NM_001369654.1Link to Protein Sequence:NP_001356583.1Re-query CCDS DB by Nucleotide ID:NM_001369654Re-query CCDS DB by Protein ID:NP_001356583Link to BLAST:NP_001356583.1
Original member Current member NCBI NM_020923.3 NP_065974.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020923.3Link to Protein Sequence:NP_065974.1Re-query CCDS DB by Nucleotide ID:NM_020923Re-query CCDS DB by Protein ID:NP_065974Link to BLAST:NP_065974.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001356583.1 2354 Q9HCK1 2354 100% 0 0
NP_065974.1 2354 Q9HCK1 2354 100% 0 0

Chromosomal Locations for CCDS 46501.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 206281850 206281909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206297246 206297373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206304717 206311593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (7065 nt):
ATGCAGAAAAGACAAGGATATTGCAGTTATTGCCGTGTGCAGTATAATAACCTGGAACAGCATTTGTTCA
GTGCTCAGCACAGGAGTTTGACCAGACAGAGTAGACGTCAAATATGTACCAGTAGTTTGATGGAACGTTT
CTTACAGGATGTACTGCAGCACCACCCATATCATTGTCAAGAGAGCAGTTCAACACAAGATGAGACACAT
GTGAATACTGGGTCATCGTCTGAAGTGGTGCATTTGGATGATGCTTTTTCTGAAGAAGAGGAAGAGGATG
AGGATAAGGTTGAGGATGAGGATGCTACCGAAGAGAGACCATCCGAGGTTTCAGAACCTATTGAAGAGTT
ACATTCCAGACCTCATAAATCTCAGGAAGGCACGCAGGAGGTTTCAGTTCGACCATCAGTTATTCAAAAA
CTGGAGAAGGGACAGCAGCAGCCCTTGGAGTTTGTTCATAAAATTGGGGCCAGTGTGAGAAAATGTAACC
TAGTAGATATTGGTCAGGCTACAAATAATAGAAGCAACTTGGTACGCCCCCCAGTGATTTGTAATGCTCC
TGCTAGTTGTTTACCTGAAAGCTCTAACGATAGACCAGTTACAGCTAATACAACTAGTTTACCACCAGCA
GCTCATTTGGATTCAGTTAGCAAATGTGACCCAAACAAAGTTGAGAAATATCTTGAACAGCCAGATGGGG
CCTCTAGAAATCCTGTGCCATCATCCCATGTAGAAACTACTTCATTTTCGTATCAGAAACATAAAGAATC
AAATAGGAAATCTTTACGCATGAATTCAGATAAGTTGGTTTTGTGGAAAGATGTAAAATCTCAGGGTAAA
ACTTTATCAGCTGGCTTGAAATTCCATGAACGCATGGGTACTAAGGGCTCCTTAAGAGTTAAATCTCCTT
CCAAATTAGCAGTAAACCCGAATAAAACTGACATGCCTTCTAATAAAGGAATCTTTGAAGATACTATTGC
AAAGAACCATGAGGAATTCTTTTCTAACATGGATTGTACCCAAGAAGAAAAGCATTTGGTTTTTAACAAG
ACAGCCTTTTGGGAACAGAAGTGCTCAGTGAGTTCTGAAATGAAGTTTGATTGTATCTCTCTTCAGTCAG
CATCTGATCAGCCCCAAGAGACTGCACAAGACTTAAGTCTTTGGAAGGAGGAGCAAATTGACCAAGAAGA
TAACTATGAGTCTAGAGGTTCAGAAATGAGTTTTGATTGCAGTTCCTCTTTTCATTCACTGACTGACCAA
TCTAAAGTGAGTGCCAAAGAAGTAAACCTTTCCAAGGAAGTACGTACTGATGTACAGTATAAGAATAATA
AATCTTATGTTTCTAAAATAAGTTCTGATTGTGATGACATTCTTCACTTGGTTACCAACCAATCCCAAAT
GATTGTTAAAGAAATAAGTCTTCAGAATGCAAGGCATATTAGCCTGGTTGACCAAAGCTATGAATCTAGT
AGTTCTGAAACGAATTTTGATTGTGATGCTTCACCTCAGTCCACTAGTGACTACCCCCAACAATCTGTAA
CAGAAGTAAACCTTCCTAAGGAAGTGCACATTGGTTTGGTTGATAAGAACTATGGTTCCAGTAGCTCTGA
AGTAAGTGCTGATTCTGTTTTCCCACTGCAGTCAGTGGTTGACAGACCCCCAGTGGCTGTCACAGAAACA
AAACTTCGGAAGAAGGCTCATACCAGCTTGGTTGATAACTATGGATCGAGTTGTTCTGAAACAAGTTTTG
ATTGTGATGTTTCTCTTGAGTCAGTAGTTGATCATCCCCAACTGACTGTCAAAGGAAGAAACCTGAAAGG
TAGACAAGTCCACCTAAAACATAAGAAGCGTAAACCCAGTAGTGCTAAAGCACATCTTGATTGTGATGTC
TCACTTGGGACAGTTGCAGATGAATCCCAGAGGGCTGTTGAAAAGATAAATCTTCTGAAGGAGAAGAATG
CTGACCTTATGGATATGAACTGTGAATCCCATGGTCCTGAAATGGGTTTTCAGGCTGATGCTCAATTAGC
TGACCAGTCTCAAGTAGCCGAAATAGAGCGTCAGAAAGTGGATGTTGACCTTGAGAATAAGAGTGTTCAG
TCTAGCCGTTCTTCTCTGAGTTCTGATTCTCCGGCTTCTCTTTATCATTCAGCTCATGATGAGCCTCAAG
AAGCTTTGGATGAAGTAAATCTTAAAGAGTTAAATATTGACATGGAAGTTAGGAGCTATGATTGCTCCAG
CTCTGAGTTGACTTTTGATTCTGACCCGCCTCTTCTGTCAGTTACTGAGCAGTCTCATCTGGATGCTGAA
GGAAAAGAACGGCACATTGACCTGGAAGATGAGAGCTGTGAGTCAGATAGTTCTGAAATAACTTTTGATT
CTGATATTCCTCTTTATTCAGTAATTGACCAACCTGAAGTAGCTGTTTATGAGGAAGAAACTGTTGATCT
GGAAAGTAAAAGTAATGAATCTTGTGTCTCTGAAATAACTTTTGATTCTGATATTCCTCTTCATTCAGGA
AATGATCACCCTGAAGTAGCTGTTAAAGAAGTAATTCAGAAAGAAGAGTACATTCACTTAGAAAGGAAGA
ATGATGAACCCAGTGGTTCTGAAATAAGTTCGGATTCCCATGCCCCTCTTCATTCAGTGACTAATTCTCC
CGAAGTAGCTGTTAAAAAGCTAAATCCTCAAAAAGAAGAGCAGGTACACTTAGAAAATAAGGAAAATGAA
CCTATTGATTCTGAAGTAAGTTTGGATTATAATATCATTTTTCATTCAGTGACTGGACGTTCTGAAGATC
CCATTAAAGAAATAAGCCTTCACACAAAAGAGCACATGTACTTAGAAAATAAGAGTGTTTTTGAAACAAG
TTTGGATTCTGATGTCCCTCTTCAGGCAGCGACTCACAAACCTGAAGTAATTGTCAAAGAAACATGGCTT
CAAAGAGAAAAGCACGCTGAATTCCAAGGTAGAAGTACTGAATTCAGTGGTTCAAAAACAAGTTTAGATT
CTGGTGTCCCTCATTATTCAGTAACTGAACCTCAAGTAGCTGTTAACAAAATAAACAGAAAGAAGCAATA
TGTTCTAGAAAACAAGAATGATAAATGTAGTGGTTCTGAAATAATTTTGGATTCTAATGTTCCACCTCAG
TCAATGACTGACCAACCTCAACTAGCTTTTTTGAAGGAAAAACATGTTAATCTGAAGGACAAAAACAGTA
AATCAGGTGATTCTAAAATAACTTTTGATTCTGAACAACTTCAGGAAGCGGTTAAAAAAATAGACCAATG
GAAGGAAGAGGTTATTGGCCTGAAAAATAAGATTAATGAACCTAGTACTTATAAATTAATACATCATCCT
GATGTTTCTGTCCAATCTGTGGCTGATCAACCCAAAGTAGCTATTAAACATGTGAACCTTGGGAATGAAA
ACCATATGTACTTGGAAGTTAAGAACAGCCAATATAGTTGTTCAGAAATGAATTTGGATTCTGGTTTCTT
GGGTCAGTCAATAGTCAATCGACCTCAAATAACTATTTTGGAGCAGGAGCACATTGAACTAGAAGGTAAG
CACAATCAATGTTGTGGTTCTGAAGTAAGTTTTGATTCTGATGACCCTCTTCAGTCAGTGGCTGACCGGC
TGAGAGAAACCGTTAAAGAAATAAGCCTTTGGAAGGATGAAGAAGTTGACACGGAAGATAGGAGAAATGA
AGCTAAGGGTTTTGAAATTATGTATGATTCTGATGTTCTTCAGCCAGTGGCTGGCCAACCTGAAGAAGTA
GTTAAGGAGGTCAGTCTTTGGAAAGAGCATGTTGACTTGGAAAATAAGATTGTCAAACCTACAGATTCCA
GAATAAATTTTGATTCTCATGAACCCCTTCAGTCCGTAACTAATAAAATTCCAGGGGCGAATAAAGAAAT
AAATCTTTTGAGGGAGGAACATGTTTGTCTGGATGATAAGGGCTATGTGCCCAGTGATTCTGAAATAATT
TATGTTTCAAATATCCCTCTTCAGTCAGTGATAAAACAACCACACATTTTGGAAGAGGAGCATGCCAGTC
TGGAAGATAAGAGCAGTAATTCTTATAGTCCTGAAGAAAGTTCTGATTCCAATGACTCTTTTCAGGCAGC
AGCAGATGAGCTTCAAAAACCTGTCAAAGAAATAAATCTTTGGAAGGAAGACCATATTTACCTGGAAGAT
AAGAGCTATAAATTAGGTGATTTTGATGTAAGTTATGCTTCTCATATTCCTGTTCAGTTTGTGACTGATC
AATCTTCTGTACCTGTCAAAGAAATAAACTTGCAAAAGAAGGATCATAATGATCTAGAAAATAAGAACTG
TGAAGTCTGTGGTTCTGAAATAAAATGTCATTCTTGTGTTCATCTTCAGTCAGAAGTTGACCAACCTCAA
GTGTCTTACAAAGAGGCAGACCTTCAGAAGGAAGAGCATGTTGTCATGGAAGAAAAGACCGATCAACCTA
GTGATTCAGAAATGATGTATGATTCTGATGTTCCTTTTCAAATAGTAGTTAACCAATTTCCAGGATCAGT
CAAAGAAACCCACCTTCCAAAGGTGGTACTTGTGGATCTGGTGCCCGGTGATAGTGATTATGAAGTAATT
TCAGATGATATTCCCCTTCAGTTAGTGACTGACCCACCTCAGTTGACTGTCAAAGATATCAGCTGTATAA
ATACAGAATGTATTGATATAGAAGATAAGAGCTGTGACTTTTTTGGTTCTGAAGTCAGATGTAATTGTAA
AGCCTCTACTCCCTCAATGACAAACCAATGCAAAGAGACTTTCAAAATAATAAACCGGAAGAAGGACTAT
ATTATTCTGGGAGAGCCAAGTTGTCAATCTTGTGGTTCTGAAATGAATTTTAATGTTGATGCCTCTGATC
AGTCCATGACTTACGAGTCACAAGGACCTGATGAGAAAATGGTGAAATATATTGATTCAGAAGATAAGAG
CTGTGGATATAATGGTTCTAAAGGAAAATTTAATTTGGAAGACACTTCTCATCGAACGACTCACCGACTG
CAGAAAGCTCACAAAGAAGCCAGTCTTCGGAAGGATCCAAGAAATGCTGGCCTAAAAGGTAAGAGCTGTC
AGTCTAGTGCTTCTGCAGTGGATTTTGGTGCCTCTTCCAAGTCAGCGCTCCATCGAAGGGCTGATAAAAA
AAAACGTTCGAAGCTAAAACATAGAGATCTAGAAGTGAGCTGTGAACCGGATGGTTTTGAGATGAATTTT
CAGTGTGCTCCCCCTCTTCCATCTGATACTGATCAGCCTCAAGAAACTGTTAAGAAAAGACACCCTTGTA
AGAAGGTATCTTCTGACTTGAAAGAAAAGAACCATGATTCCCAGTCAAGCTCTGTTCTCAAGGTTGATTC
TGTAAGGAACCTGAAAAAAGCAAAGGATGTCATAGAGGATAATCCTGATGAACCAGTTCTTGAAGCCTTG
CCTCATGTACCTCCTTCATTTGTGGGGAAAACATGGTCTCAGATAATGAGAGAAGATGACATAAAAATTA
ATGCTCTGGTGAAGGAGTTTAGGGAAGGTCGTTTCCACTGTTACTTTGATGATGACTGTGAGACCAAAAA
AGTTTCTTCGAAGGGGAAAAAAAAGGTTACCTGGGCTGACTTGCAAGGTAAGGAGGACACTGCACCAACT
CAAGCTGTGTCAGAGAGTGATGATATTGTCTGTGGTATTTCAGATATTGATGACTTGTCAGTGGCCTTAG
ATAAACCATGCCATCGTCATCCTCCAGCAGAGAGGCCTCCTAAGCAAAAGGGGCGTGTGGCTTCTCAATG
CCAGACAGCGAAAATCAGCCATAGTACTCAGACCAGTTGTAAGAATTACCCAGTGATGAAAAGAAAAATA
ATTAGACAAGAGGAAGACCCACCAAAAAGTAAGTGTTCACGTTTACAGGATGACAGAAAAACCAAAAAGA
AAGTCAAAATTGGGACAGTTGAATTTCCTGCATCATGTACTAAAGTTTTGAAGCCTATGCAACCCAAAGC
CTTAGTCTGTGTTCTTTCTTCTTTAAATATTAAACTGAAAGAGGGTGAAGGCCTTCCTTTCCCTAAAATG
AGGCACCATAGTTGGGATAATGATATTCGGTTTATATGCAAATATAAACGGAATATCTTTGATTATTATG
AGCCCTTGATTAAGCAAATTGTAATTAGTCCTCCCCTGAGTGTAATAGTACCAGAGTTTGAGAGGCGTAA
CTGGGTTAAAATTCATTTTAATAGGAGCAACCAAAACTCCAGTGCAGGAGATAATGATGCTGATGGACAA
GGCTCTGCTTCAGCGCCTTTAATGGCAGTGCCGGCAAGATATGGATTTAATTCACATCAGGGAACCAGTG
ACTCTTCTCTGTTTCTGGAAGAATCAAAGGTTCTGCATGCTCGTGAGCTTCCAAAGAAAAGAAATTTCCA
GCTAACATTTTTAAATCATGATGTTGTCAAAATCTCTCCAAAATCAGTTAGAAATAAGCTTTTGGAAAGT
CAAAGTAAAAAGAAAATTCATGGAAAGAGGGTGACAACTAGTAGTAATAAGCTAGGTTTTCCCAAAAAGG
TTTATAAACCAATTATTCTCCAGCAAAAACCCAGAAAAGCTTCAGAGAAACAGTCAATTTGGATTCGGAC
CAAACCAAGTGATATCATTAGAAAGTATATTTCGAAATACTCTGTCTTTTTACGTCATAGATATCAGTCC
AGGAGCGCTTTTCTTGGAAGGTATCTGAAGAAGAAAAAATCTGTTGTCAGTAGGCTAAAGAAGGCGAAGA
GAACAGCTAAAGTGCTTTTGAACTCTTCAGTTCCACCAGCTGGTGCCGAAGAGCTGTCAAGCGCTATGGC
AAATCCTCCTCCAAAGCGACCTGTGCGGGCTTCTTGCCGCGTTGCAAGAAGGAGGAAGAAGACTGATGAA
AGCTACCATGGCCGACAGAAAGGTCCTTCTACACCTGTGAGAGCATATGATCTGAGAAGCTCATCTTGTT
TACAACAACGTGAGAGAATGATGACTCGGCTAGCAAACAAACTGAGAGGTAATGAGGTAAAATAG

Translation (2354 aa):
MQKRQGYCSYCRVQYNNLEQHLFSAQHRSLTRQSRRQICTSSLMERFLQDVLQHHPYHCQESSSTQDETH
VNTGSSSEVVHLDDAFSEEEEEDEDKVEDEDATEERPSEVSEPIEELHSRPHKSQEGTQEVSVRPSVIQK
LEKGQQQPLEFVHKIGASVRKCNLVDIGQATNNRSNLVRPPVICNAPASCLPESSNDRPVTANTTSLPPA
AHLDSVSKCDPNKVEKYLEQPDGASRNPVPSSHVETTSFSYQKHKESNRKSLRMNSDKLVLWKDVKSQGK
TLSAGLKFHERMGTKGSLRVKSPSKLAVNPNKTDMPSNKGIFEDTIAKNHEEFFSNMDCTQEEKHLVFNK
TAFWEQKCSVSSEMKFDCISLQSASDQPQETAQDLSLWKEEQIDQEDNYESRGSEMSFDCSSSFHSLTDQ
SKVSAKEVNLSKEVRTDVQYKNNKSYVSKISSDCDDILHLVTNQSQMIVKEISLQNARHISLVDQSYESS
SSETNFDCDASPQSTSDYPQQSVTEVNLPKEVHIGLVDKNYGSSSSEVSADSVFPLQSVVDRPPVAVTET
KLRKKAHTSLVDNYGSSCSETSFDCDVSLESVVDHPQLTVKGRNLKGRQVHLKHKKRKPSSAKAHLDCDV
SLGTVADESQRAVEKINLLKEKNADLMDMNCESHGPEMGFQADAQLADQSQVAEIERQKVDVDLENKSVQ
SSRSSLSSDSPASLYHSAHDEPQEALDEVNLKELNIDMEVRSYDCSSSELTFDSDPPLLSVTEQSHLDAE
GKERHIDLEDESCESDSSEITFDSDIPLYSVIDQPEVAVYEEETVDLESKSNESCVSEITFDSDIPLHSG
NDHPEVAVKEVIQKEEYIHLERKNDEPSGSEISSDSHAPLHSVTNSPEVAVKKLNPQKEEQVHLENKENE
PIDSEVSLDYNIIFHSVTGRSEDPIKEISLHTKEHMYLENKSVFETSLDSDVPLQAATHKPEVIVKETWL
QREKHAEFQGRSTEFSGSKTSLDSGVPHYSVTEPQVAVNKINRKKQYVLENKNDKCSGSEIILDSNVPPQ
SMTDQPQLAFLKEKHVNLKDKNSKSGDSKITFDSEQLQEAVKKIDQWKEEVIGLKNKINEPSTYKLIHHP
DVSVQSVADQPKVAIKHVNLGNENHMYLEVKNSQYSCSEMNLDSGFLGQSIVNRPQITILEQEHIELEGK
HNQCCGSEVSFDSDDPLQSVADRLRETVKEISLWKDEEVDTEDRRNEAKGFEIMYDSDVLQPVAGQPEEV
VKEVSLWKEHVDLENKIVKPTDSRINFDSHEPLQSVTNKIPGANKEINLLREEHVCLDDKGYVPSDSEII
YVSNIPLQSVIKQPHILEEEHASLEDKSSNSYSPEESSDSNDSFQAAADELQKPVKEINLWKEDHIYLED
KSYKLGDFDVSYASHIPVQFVTDQSSVPVKEINLQKKDHNDLENKNCEVCGSEIKCHSCVHLQSEVDQPQ
VSYKEADLQKEEHVVMEEKTDQPSDSEMMYDSDVPFQIVVNQFPGSVKETHLPKVVLVDLVPGDSDYEVI
SDDIPLQLVTDPPQLTVKDISCINTECIDIEDKSCDFFGSEVRCNCKASTPSMTNQCKETFKIINRKKDY
IILGEPSCQSCGSEMNFNVDASDQSMTYESQGPDEKMVKYIDSEDKSCGYNGSKGKFNLEDTSHRTTHRL
QKAHKEASLRKDPRNAGLKGKSCQSSASAVDFGASSKSALHRRADKKKRSKLKHRDLEVSCEPDGFEMNF
QCAPPLPSDTDQPQETVKKRHPCKKVSSDLKEKNHDSQSSSVLKVDSVRNLKKAKDVIEDNPDEPVLEAL
PHVPPSFVGKTWSQIMREDDIKINALVKEFREGRFHCYFDDDCETKKVSSKGKKKVTWADLQGKEDTAPT
QAVSESDDIVCGISDIDDLSVALDKPCHRHPPAERPPKQKGRVASQCQTAKISHSTQTSCKNYPVMKRKI
IRQEEDPPKSKCSRLQDDRKTKKKVKIGTVEFPASCTKVLKPMQPKALVCVLSSLNIKLKEGEGLPFPKM
RHHSWDNDIRFICKYKRNIFDYYEPLIKQIVISPPLSVIVPEFERRNWVKIHFNRSNQNSSAGDNDADGQ
GSASAPLMAVPARYGFNSHQGTSDSSLFLEESKVLHARELPKKRNFQLTFLNHDVVKISPKSVRNKLLES
QSKKKIHGKRVTTSSNKLGFPKKVYKPIILQQKPRKASEKQSIWIRTKPSDIIRKYISKYSVFLRHRYQS
RSAFLGRYLKKKKSVVSRLKKAKRTAKVLLNSSVPPAGAEELSSAMANPPPKRPVRASCRVARRRKKTDE
SYHGRQKGPSTPVRAYDLRSSSCLQQRERMMTRLANKLRGNEVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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