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Report for CCDS4658.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4658.1 Public Homo sapiens 6 OR12D3 24 110 108 CCDS HistoryNCBI Gene:81797Re-query CCDS DB by CCDS ID:4658.1Re-query CCDS DB by GeneID:81797See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 4658.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396806.3 ENSP00000380023.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000396806.3Link to Ensembl Protein Viewer:ENSP00000380023.3Re-query CCDS DB by Nucleotide ID:ENST00000396806Re-query CCDS DB by Protein ID:ENSP00000380023
Original member Current member NCBI NM_030959.3 NP_112221.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030959.3Link to Protein Sequence:NP_112221.1Re-query CCDS DB by Nucleotide ID:NM_030959Re-query CCDS DB by Protein ID:NP_112221Link to BLAST:NP_112221.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_112221.1 316 Q9UGF7 316 100% 0 0

Chromosomal Locations for CCDS 4658.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 29374337 29375287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGAGAATGTCACTACAATGAATGAGTTTCTTCTACTTGGCCTGACTGGTGTTCAGGAGCTGCAGCCTT
TCTTCTTTGGGATTTTCTTAATCATTTACCTGATAAACTTGATTGGAAATGGATCTATATTGGTGATGGT
TGTTTTGGAACCACAACTCCACTCCCCTATGTATTTTTTTCTGGGAAACCTTTCTTGTCTGGATATTTCT
TATTCTTCAGTGACACTGCCCAAGCTGCTCGTAAACCTCGTGTGCAGTCGCAGGGCTATATCTTTTCTAG
GCTGTATCACCCAGCTACACTTCTTCCACTTTTTGGGAAGCACAGAGGCCATTTTACTGGCTATCATGGC
CTTTGACCGTTTTGTTGCCATCTGCAATCCTCTTCGCTACACTGTCATCATGAACCCCCAGGTGTGTATT
CTGTTGGCAGCTGCGGCCTGGCTCATCAGCTTCTTTTACGCTCTGATGCATTCTGTCATGACTGCACACC
TGAGTTTTTGTGGCTCTCAGAAACTCAATCACTTCTTCTACGATGTCAAGCCGCTCTTAGAATTGGCCTG
TAGTGACACATTACTCAATCAATGGCTTCTTTCCATTGTCACAGGCAGCATATCCATGGGAGCTTTCTTT
CTGACTCTTCTCTCCTGCTTCTATGTAATTGGCTTCCTTCTGTTTAAGAACAGGTCCTGCAGAATACTCC
ACAAGGCTCTGTCCACTTGTGCCTCCCATTTTATGGTGGTATGTCTTTTCTATGGACCTGTGGGCTTCAC
ATATATTCGTCCTGCTTCAGCCACCTCCATGATTCAGGACCGGATAATGGCCATCATGTATAGCGCCGTC
ACCCCTGTACTGAATCCACTAATCTACACCCTTAGGAACAAAGAAGTGATGATGGCTCTGAAGAAAATCT
TTGGTAGGAAGTTGTTTAAAGACTGGCAGCAACACCACTAG

Translation (316 aa):
MENVTTMNEFLLLGLTGVQELQPFFFGIFLIIYLINLIGNGSILVMVVLEPQLHSPMYFFLGNLSCLDIS
YSSVTLPKLLVNLVCSRRAISFLGCITQLHFFHFLGSTEAILLAIMAFDRFVAICNPLRYTVIMNPQVCI
LLAAAAWLISFFYALMHSVMTAHLSFCGSQKLNHFFYDVKPLLELACSDTLLNQWLLSIVTGSISMGAFF
LTLLSCFYVIGFLLFKNRSCRILHKALSTCASHFMVVCLFYGPVGFTYIRPASATSMIQDRIMAIMYSAV
TPVLNPLIYTLRNKEVMMALKKIFGRKLFKDWQQHH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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