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Report for CCDS46985.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46985.1 Public Homo sapiens 3 FBXO45 24 110 108 CCDS HistoryNCBI Gene:200933Re-query CCDS DB by CCDS ID:46985.1Re-query CCDS DB by GeneID:200933See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46985.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311630.7 ENSP00000310332.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311630.7Link to Ensembl Protein Viewer:ENSP00000310332.6Re-query CCDS DB by Nucleotide ID:ENST00000311630Re-query CCDS DB by Protein ID:ENSP00000310332
Original member Current member NCBI NM_001105573.2 NP_001099043.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001105573.2Link to Protein Sequence:NP_001099043.1Re-query CCDS DB by Nucleotide ID:NM_001105573Re-query CCDS DB by Protein ID:NP_001099043Link to BLAST:NP_001099043.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001099043.1 286 P0C2W1 286 100% 0 0

Chromosomal Locations for CCDS 46985.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 196568985 196569302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196577453 196577809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196584133 196584318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (861 nt):
ATGGCGGCGCCGGCCCCGGGGGCTGGGGCAGCCTCGGGCGGCGCTGGCTGTAGCGGCGGCGGCGCGGGCG
CGGGCGCGGGCTCGGGCTCTGGGGCCGCGGGGGCCGGGGGCCGGCTGCCCAGCCGGGTGCTGGAGTTGGT
GTTCTCTTACCTGGAGCTGTCCGAGCTGCGGAGCTGCGCCCTGGTGTGCAAGCACTGGTACCGCTGCCTG
CACGGCGATGAGAACAGCGAGGTGTGGCGGAGCCTGTGCGCCCGCAGCCTGGCAGAAGAGGCTCTGCGCA
CGGACATCCTGTGCAACCTGCCCAGCTACAAGGCCAAGATACGTGCTTTTCAACATGCCTTCAGCACTAA
TGACTGCTCCAGGAATGTCTACATTAAGAAGAATGGCTTTACTTTACATCGAAACCCCATTGCTCAGAGC
ACTGATGGTGCAAGGACCAAGATTGGTTTCAGTGAGGGCCGCCATGCATGGGAAGTGTGGTGGGAGGGCC
CTCTGGGCACTGTGGCAGTGATTGGAATTGCCACAAAACGGGCCCCCATGCAGTGCCAAGGTTATGTGGC
ATTGCTGGGCAGTGATGACCAGAGCTGGGGCTGGAATCTGGTGGACAATAATCTACTACATAATGGAGAA
GTCAATGGCAGTTTTCCACAGTGCAACAACGCACCAAAATATCAGATAGGAGAAAGAATTCGAGTCATCT
TGGACATGGAAGATAAGACTTTAGCTTTTGAACGTGGATATGAGTTCCTGGGGGTTGCTTTTAGAGGACT
TCCAAAGGTCTGCTTATACCCAGCAGTTTCTGCTGTATATGGCAACACAGAAGTGACTTTGGTTTACCTT
GGAAAACCTTTGGACGGATGA

Translation (286 aa):
MAAPAPGAGAASGGAGCSGGGAGAGAGSGSGAAGAGGRLPSRVLELVFSYLELSELRSCALVCKHWYRCL
HGDENSEVWRSLCARSLAEEALRTDILCNLPSYKAKIRAFQHAFSTNDCSRNVYIKKNGFTLHRNPIAQS
TDGARTKIGFSEGRHAWEVWWEGPLGTVAVIGIATKRAPMQCQGYVALLGSDDQSWGWNLVDNNLLHNGE
VNGSFPQCNNAPKYQIGERIRVILDMEDKTLAFERGYEFLGVAFRGLPKVCLYPAVSAVYGNTEVTLVYL
GKPLDG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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