NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS47197.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47197.1 Public Homo sapiens 5 NADK2 24 110 108 CCDS HistoryNCBI Gene:133686Re-query CCDS DB by CCDS ID:47197.1Re-query CCDS DB by GeneID:133686See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47197.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381937.9 ENSP00000371362.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000381937.9Link to Ensembl Protein Viewer:ENSP00000371362.4Re-query CCDS DB by Nucleotide ID:ENST00000381937Re-query CCDS DB by Protein ID:ENSP00000371362
Original member Current member NCBI NM_001085411.3 NP_001078880.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001085411.3Link to Protein Sequence:NP_001078880.1Re-query CCDS DB by Nucleotide ID:NM_001085411Re-query CCDS DB by Protein ID:NP_001078880Link to BLAST:NP_001078880.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001078880.1 442 Q4G0N4-1 442 100% 0 0

Chromosomal Locations for CCDS 47197.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 36195144 36195282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36197541 36197664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36200227 36200280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36201106 36201161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36207170 36207265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36211844 36211922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36217748 36217884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36219596 36219679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36225542 36225623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36226475 36226563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36227477 36227565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36241499 36241798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1329 nt):
ATGACTTGCTACCGAGGCTTCTTGCTGGGCAGCTGTTGTCGCGTGGCGGGCGGCCGGGCGGCGGCGCTGC
GGGGACCGGGTGCGGGAGGCCCCGCCGCGCGGCCCCGGCTGGGCGGTGACGGTGGCGGCCGGCGGCACCT
GGGGCAGGGGCAGCCGCGCGAGCTGGCGGGCTGTGGCAGCCGCGCGGACGGCGGCTTCCGCCCCTCCCGG
GTGGTGGTGGTGGCCAAAACCACCCGGTACGAGTTCGAGCAGCAGCGGTACCGTTACGCGGAGCTCTCGG
AGGAGGACCTGAAGCAGCTGCTTGCATTGAAAGGCTCTAGTTACAGTGGACTTCTTGAACGACATCATAT
TCACACCAAAAATGTAGAACATATTATAGATAGTTTACGGAATGAGGGAATTGAGGTTCGTCTAGTAAAG
AGGAGAGAATATGATGAAGAGACTGTTCGATGGGCAGATGCTGTCATAGCTGCAGGAGGTGATGGCACAA
TGCTGCTGGCAGCGAGTAAAGTCTTGGACAGACTTAAACCAGTTATAGGGGTAAACACTGATCCAGAACG
GTCTGAGGGTCATTTATGCCTGCCCGTTCGATATACACATTCCTTTCCAGAAGCCTTACAGAAGTTCTAT
CGTGGTGAGTTCAGGTGGTTGTGGAGGCAGAGAATCAGGTTATACCTTGAAGGGACTGGCATAAACCCTG
TACCTGTGGACCTTCACGAGCAGCAGCTAAGCTTGAATCAGCACAATAGAGCCCTTAACATTGAAAGAGC
TCATGATGAAAGGTCTGAGGCTTCAGGACCCCAACTTCTGCCAGTGAGAGCACTAAATGAAGTCTTCATT
GGGGAGAGTCTGTCATCCAGGGCTTCCTACTATGAGATTTCAGTTGATGATGGTCCATGGGAAAAACAGA
AGAGTTCAGGGCTCAATTTGTGTACTGGAACAGGATCAAAGGCCTGGTCATTCAATATTAACAGGGTTGC
AACTCAGGCTGTAGAAGATGTTTTAAATATTGCAAAACGACAAGGAAATTTGAGTCTTCCATTGAACAGA
GAATTGGTAGAGAAAGTAACAAATGAATATAATGAATCACTGCTCTACAGTCCGGAAGAACCAAAAATAC
TTTTCAGTATTCGAGAACCAATAGCAAATAGAGTTTTCTCAAGCAGTCGTCAGCGTTGTTTCTCCTCAAA
GGTTTGTGTTCGTTCTCGTTGTTGGGATGCCTGTATGGTTGTGGATGGAGGAACTTCTTTTGAGTTTAAT
GATGGTGCAATTGCTTCGATGATGATCAATAAAGAAGATGAGCTTCGAACTGTGCTTCTTGAACAGTGA

Translation (442 aa):
MTCYRGFLLGSCCRVAGGRAAALRGPGAGGPAARPRLGGDGGGRRHLGQGQPRELAGCGSRADGGFRPSR
VVVVAKTTRYEFEQQRYRYAELSEEDLKQLLALKGSSYSGLLERHHIHTKNVEHIIDSLRNEGIEVRLVK
RREYDEETVRWADAVIAAGGDGTMLLAASKVLDRLKPVIGVNTDPERSEGHLCLPVRYTHSFPEALQKFY
RGEFRWLWRQRIRLYLEGTGINPVPVDLHEQQLSLNQHNRALNIERAHDERSEASGPQLLPVRALNEVFI
GESLSSRASYYEISVDDGPWEKQKSSGLNLCTGTGSKAWSFNINRVATQAVEDVLNIAKRQGNLSLPLNR
ELVEKVTNEYNESLLYSPEEPKILFSIREPIANRVFSSSRQRCFSSKVCVRSRCWDACMVVDGGTSFEFN
DGAIASMMINKEDELRTVLLEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH