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Report for CCDS47345.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
47345.1 |
Public |
Homo sapiens |
5 |
EIF4E1B |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:253314](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:47345.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:253314](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 5 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 47345.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000318682.11 |
ENSP00000323714.6 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000318682.11](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000323714.6](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000318682](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000323714](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000504597.5 |
ENSP00000427633.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000504597.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000427633.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000504597](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000427633](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000647833.1 |
ENSP00000497422.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000647833.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000497422.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000647833](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000497422](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001099408.2 |
NP_001092878.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001099408.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001092878.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001099408](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001092878](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001092878.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375362.1 |
NP_001362291.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375362.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362291.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375362](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362291](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362291.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 47345.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (729 nt): ATGCTTGCTGTTGAGGTGAGTGAAGCTGAGGGTGGAATCCGAGAGTGGGAGGAGGAGGAGAAGGAGGAGG AGGCAGCAGAGAGGACGCCCACAGGAGAAAAGTCTCCAAACTCTCCCAGGACTTTGCTGTCTCTGAGAGG GAAGGCCCGGACGGGGGGCCCCATGGAAGTCAAGCTGGAGCTGCACCCCTTGCAGAACAGGTGGGCTCTG TGGTTCTTCAAGAATGACCGCAGCCGGGCCTGGCAGGACAACCTGCACCTGGTCACCAAGGTGGACACTG TGGAGGACTTCTGGGCGCTATACAGTCACATCCAGCTGGCCAGCAAGCTCTCCTCTGGCTGTGACTACGC CCTCTTCAAGGATGGCATCCAGCCCATGTGGGAGGACAGCAGGAATAAACGGGGTGGCCGCTGGCTGGTC AGCCTGGCCAAGCAGCAGCGCCACATTGAGCTGGACCGGCTGTGGCTGGAGACGCTGCTGTGTCTGATCG GGGAGAGCTTTGAGGAACACAGCAGAGAGGTATGTGGGGCCGTCGTCAACATCCGCACCAAGGGGGACAA GATCGCTGTGTGGACGAGGGAGGCGGAAAACCAGGCGGGCGTGCTGCACGTTGGGCGTGTATACAAAGAG CGCCTGGGCCTCTCCCCAAAGACCATCATTGGGTACCAGGCCCATGCAGACACAGCCACCAAGAGCAACT CCCTAGCCAAGAACAAGTTTGTGGTGTGA
Translation (242 aa): MLAVEVSEAEGGIREWEEEEKEEEAAERTPTGEKSPNSPRTLLSLRGKARTGGPMEVKLELHPLQNRWAL WFFKNDRSRAWQDNLHLVTKVDTVEDFWALYSHIQLASKLSSGCDYALFKDGIQPMWEDSRNKRGGRWLV SLAKQQRHIELDRLWLETLLCLIGESFEEHSREVCGAVVNIRTKGDKIAVWTREAENQAGVLHVGRVYKE RLGLSPKTIIGYQAHADTATKSNSLAKNKFVV
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