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Report for CCDS47596.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47596.1 Public Homo sapiens 7 ZNF92 24 110 108 CCDS HistoryNCBI Gene:168374Re-query CCDS DB by CCDS ID:47596.1Re-query CCDS DB by GeneID:168374See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47596.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000450302.2 ENSP00000396126.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000450302.2Link to Ensembl Protein Viewer:ENSP00000396126.2Re-query CCDS DB by Nucleotide ID:ENST00000450302Re-query CCDS DB by Protein ID:ENSP00000396126
Original member Current member NCBI NM_007139.4 NP_009070.2 Accepted alive Link to Nucleotide Sequence:NM_007139.4Link to Protein Sequence:NP_009070.2Re-query CCDS DB by Nucleotide ID:NM_007139Re-query CCDS DB by Protein ID:NP_009070Link to BLAST:NP_009070.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009070.2 517 Q03936-2 517 100% 0 0

Chromosomal Locations for CCDS 47596.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 65388883 65388901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 65398341 65399875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1554 nt):
ATGGTAGACAAAACCCCAGTTATGTGTTCTCATTTTGCCCAAGATGTTTGGCCAGAGCACAGCATAAAAG
ATTCTTTCCAAAAAGTGATACTGAGAACATATGGAAAATATGGACATGAGAATTTACAGCTAAGAAAAGA
CCATAAAAGTGTGGATGCATGTAAGGTGTACAAAGGAGGTTATAATGGACTTAACCAGTGTTTGACAACT
ACTGACAGCAAGATATTTCAGTGTGATAAATATGTGAAAGTCTTTCATAAATTTCCAAATGTAAATAGAA
ATAAGATAAGACATACTGGAAAGAAACCTTTCAAATGTAAAAACCGTGGCAAATCATTTTGCATGCTTTC
ACAATTAACTCAACATAAGAAAATTCATACTAGAGAGTATTCTTACAAATGTGAAGAATGTGGTAAAGCC
TTTAACTGGTCCTCAACCCTTACTAAACATAAGATAATTCATACTGGAGAAAAACCCTACAAATGTGAAG
AATGTGGCAAAGCTTTTAACCGGTCCTCAAATCTTACTAAACATAAAATAATTCATACTGGAGAGAAACC
CTACAAATGTGAAGAATGTGGCAAAGCTTTTAACCGGTCCTCAACCCTTACTAAACATAAAAGAATTCAT
ACAGAAGAGAAACCCTACAAATGTGAAGAATGTGGCAAGGCCTTTAACCAGTTCTCGATTCTTAATAAAC
ATAAGAGAATTCATATGGAAGATAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAGAGTATTCTC
AATTCTTAAAAAACATAAGATAATCCATACTGGGGAAAAACCATACAAATGTGAAGAATGTGGCAAAGCC
TTTAACCAGTTCTCAAACCTTACTAAACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTGATG
AATGTGGCAAAGCCTTTAACCAGTCCTCAACCCTTACTAAACATAAAAGAATTCATACGGGAGAAAAACC
CTACAAATGTGAAGAATGTGGCAAAGCTTTTAAACAGTCCTCAACCCTTACTGAACATAAGATAATTCAT
ACTGGAGAGAAACCCTACAAATGTGAAAAATGTGGCAAGGCCTTTAGCTGGTCCTCAGCTTTTACTAAAC
ATAAGAGAAATCATATGGAAGATAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAGTGTATTCTC
AACCCTTACTAAACATAAAATAATTCATACTAGAGAAAAACCCTACAAATGTGAAGAATGTGGCAAAGCC
TTTAACCAGTCCTCAATTTTTACTAAACATAAGATAATTCACACTGAAGGGAAATCCTACAAATGTGAAA
AATGTGGCAATGCTTTTAACCAGTCCTCAAACCTTACTGCACGTAAGATAATTTATACTGGAGAGAAACC
CTACAAATATGAAGAATGTGACAAAGCCTTTAACAAGTTCTCAACCCTTATTACACATCAGATAATTTAT
ACTGGAGAGAAACCCTGCAAACATGAATGTGGCAGAGCCTTTAACAAATCCTCAAATTATACTAAAGAGA
AACTACAAACCTGA

Translation (517 aa):
MVDKTPVMCSHFAQDVWPEHSIKDSFQKVILRTYGKYGHENLQLRKDHKSVDACKVYKGGYNGLNQCLTT
TDSKIFQCDKYVKVFHKFPNVNRNKIRHTGKKPFKCKNRGKSFCMLSQLTQHKKIHTREYSYKCEECGKA
FNWSSTLTKHKIIHTGEKPYKCEECGKAFNRSSNLTKHKIIHTGEKPYKCEECGKAFNRSSTLTKHKRIH
TEEKPYKCEECGKAFNQFSILNKHKRIHMEDKPYKCEECGKAFRVFSILKKHKIIHTGEKPYKCEECGKA
FNQFSNLTKHKIIHTGEKPYKCDECGKAFNQSSTLTKHKRIHTGEKPYKCEECGKAFKQSSTLTEHKIIH
TGEKPYKCEKCGKAFSWSSAFTKHKRNHMEDKPYKCEECGKAFSVFSTLTKHKIIHTREKPYKCEECGKA
FNQSSIFTKHKIIHTEGKSYKCEKCGNAFNQSSNLTARKIIYTGEKPYKYEECDKAFNKFSTLITHQIIY
TGEKPCKHECGRAFNKSSNYTKEKLQT


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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