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Report for CCDS47704.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47704.1 Public Homo sapiens 7 CCDC136 24 110 108 CCDS HistoryNCBI Gene:64753Re-query CCDS DB by CCDS ID:47704.1Re-query CCDS DB by GeneID:64753See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47704.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297788.9 ENSP00000297788.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297788.9Link to Ensembl Protein Viewer:ENSP00000297788.4Re-query CCDS DB by Nucleotide ID:ENST00000297788Re-query CCDS DB by Protein ID:ENSP00000297788
Original member Current member NCBI NM_022742.5 NP_073579.5 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022742.5Link to Protein Sequence:NP_073579.5Re-query CCDS DB by Nucleotide ID:NM_022742Re-query CCDS DB by Protein ID:NP_073579Link to BLAST:NP_073579.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_073579.5 1154 Q96JN2-1 1154 100% 0 0

Chromosomal Locations for CCDS 47704.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 128792412 128792427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128794348 128794602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128794694 128794768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128801186 128801509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128804650 128804761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128805359 128805524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128805761 128805901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128806237 128806395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128806688 128806858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128807360 128807545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128809450 128809644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128810139 128810366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128811800 128812312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128812708 128812929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128814638 128814919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128815614 128815931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128817758 128817859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3465 nt):
ATGCAAGCTATGGAGGGGGAGGTGTTACTCCCAGCTCTCTATGAGGAGGAAGAGGAAGAGGAAGAGGAGG
AAGAAGAGGTGGAAGAAGAAGAAGAACAAGTGCAGAAAGGTGGCAGTGTTGGCTCTCTGTCAGTCAACAA
GCACCGGGGACTGAGCCTCACGGAGACAGAGCTGGAGGAGCTGCGGGCTCAGGTGCTGCAGCTGGTGGCA
GAACTGGAGGAGACCCGGGAACTGGCAGGGCAGCATGAGGATGACTCCTTGGAGCTACAGGGGCTCCTGG
AGGATGAACGGCTAGCCAGCGCCCAGCAGGCAGAGGTGTTCACCAAGCAGATCCAGCAGCTCCAAGGTGA
GCTGCGTTCTCTACGGGAGGAGATTTCCCTGTTAGAGCATGAGAAAGAAAGCGAACTTAAGGAAATAGAA
CAGGAATTGCATTTGGCCCAGGCTGAGATCCAGAGTCTGCGGCAAGCAGCAGAGGATTCCGCAACTGAAC
ATGAGAGTGACATAGCATCCCTGCAGGAGGATCTCTGCCGGATGCAGAATGAACTTGAAGACATGGAACG
CATTCGGGGAGATTATGAGATGGAGATCGCCTCCCTCCGTGCAGAAATGGAAATGAAGAGCTCTGAACCA
TCCGGTAGTTTAGGTCTCTCAGATTACTCTGGGTTACAAGAAGAACTGCAGGAGCTGCGGGAACGCTACC
ATTTCCTGAATGAGGAATACCGGGCCCTGCAGGAGAGCAACAGCAGCCTCACGGGGCAGCTTGCAGATCT
GGAGAGTGAGAGGACACAGAGAGCAACAGAGAGATGGCTGCAGTCCCAAACACTGAGTATGACGTCAGCA
GAGTCTCAGACTTCAGAAATGGATTTCTTAGAGCCTGATCCTGAAATGCAGTTGTTACGGCAGCAGCTAC
GGGATGCTGAAGAGCAGATGCATGGCATGAAGAACAAGTGTCAGGAATTGTGTTGTGAGTTGGAAGAGCT
ACAGCATCATCGCCAGGTCAGTGAGGAGGAGCAGAGGCGGCTGCAGAGGGAGCTCAAGTGTGCTCAGAAT
GAGGTGCTTCGGTTTCAGACCTCCCACAGTGTCACCCAGAATGAGGAGCTGAAGTCCAGACTCTGTACCC
TGCAGAAAAAATATGATACTAGCCAGGATGAGCAGAACGAGCTCTTGAAGATGCAGCTGCAACTTCAGAC
TGAGCTCCGGCAGCTCAAAGTCATGAAATCCACACTTGTAGAAAACCAGAGTGAGAAGGAGTTACTGTGC
CGGCTGCAGAAGCTGCACCTCCAGCACCAGAACGTCACATGTGAGAAGGAAAAGCTGCTGGAACGGCAGC
AGCAGCTGCAGGAGGAGCTGCAGTGCCATGAGGCAGAGCTGCAGCACCTCAGGGATACGGTGGCCTCCTT
CAAAGAGAGCAATGAGAAGGACACAGAGACGCACGCTCAGCTTCAGGAGATGAAGCAGCTGTACCAGGCC
AGCAAGGACGAGCTGGAGCGGCAGAAGCACATGTATGACCAGCTGGAGCAGGACCTCCTGCTCTGCCAGC
TGGAGCTGAAAGAGCTCAAGGCCTCCCACCCCATTCCGGAGGACAAAGGAAAGTGTGCTAATAAGTGTGA
CACACTGCTGTCCAGACTGACAGAATTGCAGGAAAAGTACAAGGCCAGCCAGAAGGAGATGGGGCAGCTG
CAGATGGAGCAGTGTGAGCTCCTGGAGGATCAGAGGAGGATGCAGGAGGAGCAGGGCCAGCTGCAGGAAG
AGCTGCACAGGCTCACACTGCCACTGCCAAAGAGTGGCCTCTTACTCAAGAGTCAGGAGCTACTCACCAA
GTTAGAAGACCTGTGTGAGCTGCAGCTGCTCTACCAAGGCATGCAGGAGGAACAGAAGAAGCTGATACAG
AACCAAGACTGTGTATTAAAAGAACAATTAGAGATCCACGAAGAGCTGCGACGTTTCAAAGAGTCTCATT
TCCAGGAAGTGTTGGAGAATCCCGATGATTCCAAATTGGCTAAGTCCTCCAAATGTAATCGAAACAAGCA
ATCCAAGCTGCTCATGGAGCAGATGCAGGCCCTGCAGGTGATGTATGACGCCGGTCAGGCGAAGCAGGAG
CTCTTGCAGCAAGAGCAAGGGAGGCTCCTAGAGGAGCGGAAGAGGCTGCAGGCAGACTTGCAGCTCTGCC
TGGAAGAAATGCAGCTGCTTCAAGTCCAGTCCCCTTCTATAAAAATGAGCCTTGAGTCCTACGGGAAGAG
CTATGGTAGCATGGTCCCCAGCAATGAGAACTGTCGCAAGACTTATGATACCACTGTGGATGACAATGAG
AGCTATTACAAGAGTTACACCAGCACCCAGACCAGCAGCAAGAGCTTTCTCAAGAGCTATGACAGCAGCA
CCAGTGCCAGTGAGGCCTATGGGAAGAGTTACTGCACTACCAGCAACAGCAGCATTACCTATAAGAAGAG
TTACGGCAGCACCAGTAGCTCTGACACCTGCCAGAAGAGTTTTGTCAGCAGCTGCACTGACGAGGAACCT
GCTGAGCCTGAAGACATGGAGCGCTTTGAGGAAATGGTTGTGAAAGTGCTGATCAAGCTGCAGGCGGTGC
AGGCCATGTACCAGATAAGCCAGGAGGAACACAGCCAGCTGCAAGAGCAGATGGAAAAGTTACTGGCCAA
GCAGAAAGACCTGAAGGAAGAGCTGGATGCCTGTGAAAGGGAGTTCAAGGAGTGCATGGAATGCCTTGAA
AAGCCCATGGCCCCCCAGAACGACAAGAATGAGATCAAAGAACTGCAGACCAAGCTGCGGGAGCTGCAGC
TGCAATACCAGGCTAGCATGGATGAGCAGGGGCGGCTTCTGGTAGTGCAGGAGCAGCTGGAGGGGCAGCT
GCAGTGCTGCCAGGAGGAGCTCCGCCAGCTCAGGGAGAAGAGGCCTTCTGTTGTCAAAGAAGCCCGGGGG
AAGAATGCTAATAAGAACATGAACAAGAATGCCAATGGGGTTAAAATGAAAAAGGTGACCAAGCCATGCT
CGGATACTTCTGAGAGCGACCTTGAGACCAGAAAGAGTCTGGAGGTAGTGCTGTACTACAAGGCCAGCCA
GAGGAAATTAGATGGACTAGCAAAAGAGGAGGAAAAGAAAGAGGAGATGGAGGAGGAAAAAAAGCAAGTG
AAAGAGGAAGCAAAGGAGCAGTGTGGGGATGAGCTAGTTGCTGAGCCAGCAGATCCTGAGGAAGCTAAAT
CCACAGAAGATCAGGAGGAAAATGAAGAGGACAAAGAGGAAGAGGAGAAGGAAGAAGACAGTGAAGAGGA
GGAGGATGACGCCGACTCTTCCCTTGAAAGTCCCGAAGAAAATAACCCCCTCAGACTTTCCGAGAGCAAA
AAGTCATCCCCTACCCCCAATCCCCCCATCTTCTCCTTGCCTCTTGTAGGCCTGGTGGTCATCTCGGCTT
TGCTCTGGTGCTGGTGGGCTGAGACGTCGTCCTAA

Translation (1154 aa):
MQAMEGEVLLPALYEEEEEEEEEEEEVEEEEEQVQKGGSVGSLSVNKHRGLSLTETELEELRAQVLQLVA
ELEETRELAGQHEDDSLELQGLLEDERLASAQQAEVFTKQIQQLQGELRSLREEISLLEHEKESELKEIE
QELHLAQAEIQSLRQAAEDSATEHESDIASLQEDLCRMQNELEDMERIRGDYEMEIASLRAEMEMKSSEP
SGSLGLSDYSGLQEELQELRERYHFLNEEYRALQESNSSLTGQLADLESERTQRATERWLQSQTLSMTSA
ESQTSEMDFLEPDPEMQLLRQQLRDAEEQMHGMKNKCQELCCELEELQHHRQVSEEEQRRLQRELKCAQN
EVLRFQTSHSVTQNEELKSRLCTLQKKYDTSQDEQNELLKMQLQLQTELRQLKVMKSTLVENQSEKELLC
RLQKLHLQHQNVTCEKEKLLERQQQLQEELQCHEAELQHLRDTVASFKESNEKDTETHAQLQEMKQLYQA
SKDELERQKHMYDQLEQDLLLCQLELKELKASHPIPEDKGKCANKCDTLLSRLTELQEKYKASQKEMGQL
QMEQCELLEDQRRMQEEQGQLQEELHRLTLPLPKSGLLLKSQELLTKLEDLCELQLLYQGMQEEQKKLIQ
NQDCVLKEQLEIHEELRRFKESHFQEVLENPDDSKLAKSSKCNRNKQSKLLMEQMQALQVMYDAGQAKQE
LLQQEQGRLLEERKRLQADLQLCLEEMQLLQVQSPSIKMSLESYGKSYGSMVPSNENCRKTYDTTVDDNE
SYYKSYTSTQTSSKSFLKSYDSSTSASEAYGKSYCTTSNSSITYKKSYGSTSSSDTCQKSFVSSCTDEEP
AEPEDMERFEEMVVKVLIKLQAVQAMYQISQEEHSQLQEQMEKLLAKQKDLKEELDACEREFKECMECLE
KPMAPQNDKNEIKELQTKLRELQLQYQASMDEQGRLLVVQEQLEGQLQCCQEELRQLREKRPSVVKEARG
KNANKNMNKNANGVKMKKVTKPCSDTSESDLETRKSLEVVLYYKASQRKLDGLAKEEEKKEEMEEEKKQV
KEEAKEQCGDELVAEPADPEEAKSTEDQEENEEDKEEEEKEEDSEEEEDDADSSLESPEENNPLRLSESK
KSSPTPNPPIFSLPLVGLVVISALLWCWWAETSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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