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Report for CCDS47901.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47901.1 Public Homo sapiens 8 OSR2 24 110 108 CCDS HistoryNCBI Gene:116039Re-query CCDS DB by CCDS ID:47901.1Re-query CCDS DB by GeneID:116039See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47901.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297565.9 ENSP00000297565.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297565.9Link to Ensembl Protein Viewer:ENSP00000297565.4Re-query CCDS DB by Nucleotide ID:ENST00000297565Re-query CCDS DB by Protein ID:ENSP00000297565
Original member Current member EBI ENST00000522510.5 ENSP00000430780.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000522510.5Link to Ensembl Protein Viewer:ENSP00000430780.1Re-query CCDS DB by Nucleotide ID:ENST00000522510Re-query CCDS DB by Protein ID:ENSP00000430780
Original member Current member NCBI NM_001142462.3 NP_001135934.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001142462.3Link to Protein Sequence:NP_001135934.1Re-query CCDS DB by Nucleotide ID:NM_001142462Re-query CCDS DB by Protein ID:NP_001135934Link to BLAST:NP_001135934.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001135934.1 312 Q8N2R0-1 312 100% 0 0

Chromosomal Locations for CCDS 47901.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 98948953 98949608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 98950656 98950755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 98951519 98951701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGGGAGCAAGGCTCTGCCAGCGCCCATCCCGCTCCACCCGTCGCTGCAGCTCACCAATTACTCCTTCC
TGCAGGCCGTGAACACCTTCCCGGCCACGGTGGACCACCTGCAGGGCCTGTACGGTCTCAGCGCGGTACA
GACCATGCACATGAACCACTGGACGCTGGGGTATCCCAATGTGCACGAGATCACCCGCTCCACCATCACG
GAGATGGCGGCGGCGCAGGGCCTCGTGGACGCGCGCTTCCCCTTCCCGGCCCTGCCTTTTACCACCCACC
TATTCCACCCCAAGCAGGGGGCCATTGCCCACGTCCTCCCAGCCCTGCACAAGGACCGGCCCCGTTTTGA
CTTTGCCAATTTGGCGGTGGCTGCCACGCAAGAGGATCCGCCTAAGATGGGAGACCTGAGCAAGCTGAGC
CCAGGACTGGGTAGCCCCATCTCGGGCCTCAGTAAATTGACTCCGGACAGAAAGCCCTCTCGAGGAAGGT
TGCCCTCCAAAACGAAAAAAGAGTTTATCTGCAAGTTTTGCGGCAGACACTTTACCAAATCCTACAATTT
GCTCATCCATGAGAGGACCCACACGGACGAGAGGCCGTACACGTGTGACATCTGCCACAAGGCCTTCCGG
AGGCAAGATCACCTGCGGGATCACAGATACATCCATTCCAAAGAAAAACCCTTCAAATGTCAGGAGTGTG
GGAAAGGATTTTGTCAGTCTAGAACTCTAGCAGTTCACAAAACTTTACACATGCAGGAATCTCCACACAA
ATGTCCCACATGTGGAAGAACCTTTAATCAGAGAAGTAATCTGAAAACTCACCTTCTCACCCATACAGAC
ATCAAGCCCTACAGCTGCGAGCAGTGCGGCAAAGTGTTCAGGCGAAACTGTGATCTGCGGCGGCACAGCC
TGACTCACACCCCGCGGCAGGACTTCTAG

Translation (312 aa):
MGSKALPAPIPLHPSLQLTNYSFLQAVNTFPATVDHLQGLYGLSAVQTMHMNHWTLGYPNVHEITRSTIT
EMAAAQGLVDARFPFPALPFTTHLFHPKQGAIAHVLPALHKDRPRFDFANLAVAATQEDPPKMGDLSKLS
PGLGSPISGLSKLTPDRKPSRGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFR
RQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQESPHKCPTCGRTFNQRSNLKTHLLTHTD
IKPYSCEQCGKVFRRNCDLRRHSLTHTPRQDF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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