NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS48061.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48061.1 Public Homo sapiens 9 NDOR1 24 110 108 CCDS HistoryNCBI Gene:27158Re-query CCDS DB by CCDS ID:48061.1Re-query CCDS DB by GeneID:27158See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48061.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371521.8 ENSP00000360576.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371521.8Link to Ensembl Protein Viewer:ENSP00000360576.4Re-query CCDS DB by Nucleotide ID:ENST00000371521Re-query CCDS DB by Protein ID:ENSP00000360576
Original member Current member NCBI NM_001144026.3 NP_001137498.1 Accepted alive Link to Nucleotide Sequence:NM_001144026.3Link to Protein Sequence:NP_001137498.1Re-query CCDS DB by Nucleotide ID:NM_001144026Re-query CCDS DB by Protein ID:NP_001137498Link to BLAST:NP_001137498.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137498.1 606 Q9UHB4-2 606 100% 0 0

Chromosomal Locations for CCDS 48061.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 137205778 137205912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137206232 137206309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137212502 137212599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137213780 137213878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137213967 137214068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137214204 137214413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137214570 137214691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137214798 137215018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137215095 137215202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137215407 137215521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137215659 137215805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137215899 137216017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137216067 137216188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137216272 137216416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1821 nt):
ATGCCGAGCCCGCAGCTTCTGGTGCTCTTCGGCAGCCAGACAGGCACGGCTCAGGATGTGTCGGAGAGAC
TGGGTCGCGAGGCCCGGCGCCGGCGGCTTGGCTGCCGGGTGCAGGCCCTGGACTCCTACCCGGTGGTGAA
TCTGATTAACGAGCCCCTGGTGATATTTGTTTGTGCAACTACAGGCCAAGGAGACCCCCCTGACAACATG
AAGAACTTCTGGAGGTTTATATTCCGGAAGAACCTGCCCTCCACTGCCCTCTGTCAGATGGACTTTGCCG
TCCTGGGCCTCGGGGACTCCTCATACGCCAAGTTCAACTTCGTGGCCAAGAAGCTGCACCGACGGCTACT
GCAGCTTGGGGGCAGCGCCCTCCTGCCCGTGTGCCTGGGCGATGACCAGCATGAGCTGGGGCCCGACGCT
GCTGTGGACCCCTGGCTGCGAGACTTGTGGGACAGGGTTCTGGGGCTGTACCCGCCGCCTCCGGGCCTCA
CTGAGATCCCTCCCGGAGTCCCCCTGCCCTCCAAGTTCACCCTGCTGTTCCTCCAAGAGGCACCCAGCAC
GGGCTCTGAGGGGCAGCGGGTAGCTCACCCCGGCTCTCAGGAGCCCCCGTCAGAGTCGAAGCCCTTCCTA
GCACCCATGATCTCCAACCAGAGAGTCACCGGCCCCTCCCACTTCCAGGACGTTCGGCTGATTGAGTTTG
ACATCTTGGGCTCTGGCATCAGCTTTGCTGCTGGTGATGTGGTGCTGATTCAGCCCTCCAACTCGGCTGC
CCATGTCCAGCGGTTCTGCCAGGTGCTGGGCCTGGACCCTGACCAGCTCTTCATGCTGCAGCCGCGGGAG
CCAGATGTCTCCTCCCCCACGAGGCTGCCCCAGCCCTGCTCCATGCGGCACCTCGTGTCCCACTACCTGG
ACATCGCCAGCGTGCCTCGCCGCTCCTTCTTCGAACTCCTGGCCTGTCTATCCCTCCATGAGCTGGAGCG
GGAGAAGCTGCTGGAGTTCAGTTCTGCCCAAGGCCAGGAGGAGCTCTTTGAATACTGCAACCGGCCCCGC
AGGACCATCCTGGAGGTGCTCTGTGACTTCCCGCACACAGCTGCCGCCATCCCTCCCGACTACCTGTTGG
ACCTCATCCCCGTTATCCGGCCGAGGGCCTTCTCCATCGCCTCCTCGCTGCTGACTCACCCCTCACGGCT
GCAGATCCTCGTGGCTGTAGTGCAGTTCCAGACTCGCCTCAAGGAGCCCCGCCGGGGCCTCTGCTCCTCC
TGGCTGGCATCCCTGGACCCTGGGCAAGGACCTGTCCGGGTGCCCCTCTGGGTGCGGCCTGGGAGTCTGG
CCTTCCCAGAGACACCAGACACACCTGTGATCATGGTGGGGCCTGGCACTGGGGTAGCCCCCTTCCGAGC
AGCCATCCAGGAGCGTGTGGCCCAGGGCCAGACTGGAAACTTCTTGTTTTTTGGCTGCCGCTGGCGGGAC
CAAGACTTCTACTGGGAGGCTGAGTGGCAGGAGCTGGAGAAGCGGGACTGTCTGACCCTCATCCCTGCCT
TCTCCCGGGAACAGCCCCCAGCCCTGTTCTCTGCCCTACAGGAGCAGAAAGTATATGTGCAGCACCGGCT
CCGGGAGCTGGGGTCGCTTGTGTGGGAACTGCTGGACCGCCAGGGTGCATACTTCTACCTGGCAGGCAAC
GCCAAGTCCATGCCAGCGGACGTCTCGGAAGCCCTGATGTCCATCTTCCAGGAGGAGGGTGGACTCTGCA
GCCCGGACGCAGCCGCGTATCTAGCCAGGCTCCAGCAGACACGGCGCTTCCAGACAGAGACGTGGGCCTG
A

Translation (606 aa):
MPSPQLLVLFGSQTGTAQDVSERLGREARRRRLGCRVQALDSYPVVNLINEPLVIFVCATTGQGDPPDNM
KNFWRFIFRKNLPSTALCQMDFAVLGLGDSSYAKFNFVAKKLHRRLLQLGGSALLPVCLGDDQHELGPDA
AVDPWLRDLWDRVLGLYPPPPGLTEIPPGVPLPSKFTLLFLQEAPSTGSEGQRVAHPGSQEPPSESKPFL
APMISNQRVTGPSHFQDVRLIEFDILGSGISFAAGDVVLIQPSNSAAHVQRFCQVLGLDPDQLFMLQPRE
PDVSSPTRLPQPCSMRHLVSHYLDIASVPRRSFFELLACLSLHELEREKLLEFSSAQGQEELFEYCNRPR
RTILEVLCDFPHTAAAIPPDYLLDLIPVIRPRAFSIASSLLTHPSRLQILVAVVQFQTRLKEPRRGLCSS
WLASLDPGQGPVRVPLWVRPGSLAFPETPDTPVIMVGPGTGVAPFRAAIQERVAQGQTGNFLFFGCRWRD
QDFYWEAEWQELEKRDCLTLIPAFSREQPPALFSALQEQKVYVQHRLRELGSLVWELLDRQGAYFYLAGN
AKSMPADVSEALMSIFQEEGGLCSPDAAAYLARLQQTRRFQTETWA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH