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Report for CCDS4866.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4866.1 Public Homo sapiens 6 MRPS10 24 110 108 CCDS HistoryNCBI Gene:55173Re-query CCDS DB by CCDS ID:4866.1Re-query CCDS DB by GeneID:55173See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4866.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000053468.4 ENSP00000053468.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000053468.4Link to Ensembl Protein Viewer:ENSP00000053468.3Re-query CCDS DB by Nucleotide ID:ENST00000053468Re-query CCDS DB by Protein ID:ENSP00000053468
Original member Current member NCBI NM_018141.4 NP_060611.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018141.4Link to Protein Sequence:NP_060611.2Re-query CCDS DB by Nucleotide ID:NM_018141Re-query CCDS DB by Protein ID:NP_060611Link to BLAST:NP_060611.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060611.2 201 P82664 201 100% 0 0

Chromosomal Locations for CCDS 4866.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 42208289 42208372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42208858 42208947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42210488 42210596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42211781 42211917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42214120 42214192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42214280 42214344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 42217802 42217849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (606 nt):
ATGGCGGCGCGGACAGCGTTCGGTGCTGTGTGCCGGCGCCTCTGGCAGGGATTGGGGAATTTTTCTGTAA
ACACTTCTAAGGGCAATACAGCCAAAAATGGTGGCTTGCTTCTCAGTACCAATATGAAGTGGGTACAGTT
TTCAAACCTACACGTTGATGTTCCAAAGGATTTGACCAAACCTGTGGTAACAATCTCTGATGAACCAGAC
ATATTATATAAGCGCCTCTCGGTTTTGGTGAAAGGTCACGATAAGGCTGTATTGGACAGTTATGAATATT
TTGCTGTGCTTGCTGCTAAAGAACTTGGTATCTCTATTAAAGTACATGAACCTCCAAGGAAAATAGAGCG
ATTTACTCTTCTCCAATCAGTGCATATTTACAAGAAGCACAGAGTTCAGTATGAAATGAGAACACTTTAC
AGATGTTTAGAGTTAGAACATCTAACTGGAAGCACAGCAGATGTCTACTTGGAATATATTCAGCGAAACT
TACCTGAAGGGGTTGCCATGGAAGTAACAAAGACACAATTAGAACAGTTACCAGAACACATCAAGGAGCC
AATCTGGGAAACACTATCAGAAGAAAAAGAAGAAAGCAAGTCATAA

Translation (201 aa):
MAARTAFGAVCRRLWQGLGNFSVNTSKGNTAKNGGLLLSTNMKWVQFSNLHVDVPKDLTKPVVTISDEPD
ILYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISIKVHEPPRKIERFTLLQSVHIYKKHRVQYEMRTLY
RCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTQLEQLPEHIKEPIWETLSEEKEESKS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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