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Report for CCDS48816.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48816.1 Public Mus musculus 11 Zswim7 23 108 98 CCDS HistoryNCBI Gene:69747Re-query CCDS DB by CCDS ID:48816.1Re-query CCDS DB by GeneID:69747See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48816.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072916.4 ENSMUSP00000072688.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072916.4Link to Ensembl Protein Viewer:ENSMUSP00000072688.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000072916Re-query CCDS DB by Protein ID:ENSMUSP00000072688
Original member Current member NCBI NM_027198.1 NP_081474.1 Accepted alive Link to Nucleotide Sequence:NM_027198.1Link to Protein Sequence:NP_081474.1Re-query CCDS DB by Nucleotide ID:NM_027198Re-query CCDS DB by Protein ID:NP_081474Link to BLAST:NP_081474.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081474.1 152 Q9CWQ2 152 100% 0 0

Chromosomal Locations for CCDS 48816.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 62267454 62267606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62268704 62268808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62273712 62273814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62276618 62276639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62281257 62281332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (459 nt):
ATGGCGGTCGCGCTCCCGGAGGTGGTGGAAGAGCTCCTGAGCGAGATGGCCGCCGCTGTGCGAGACAGCG
CGAGAATTCCCGACGAGCTTCTCTTATCGCTGGAGTTTGTGTTTGGGTCATCGGCCATCCAGGCCTTGGA
CCTAGTCGATCGAGAGTCCGTCACTTTAATCTCATCACCCAGTGGAAGGCGTGTTTACCAGGTGCTAGGG
AGTTCTGGCAAAACATATACATGTCTGGCTTCCTGTCATTACTGCTCGTGCCCAGCATTCTCCTTCTCAG
TGTTACGGAAGAGTGACAGCCTGCTGTGTAAGCATCTTCTGGCAATTTACCTTAGTCAGCTTCTGAGGAA
CTGCCAGCAGCTCCATGTGTCTGACAAGCAACTGACAGACCTATTGATGGAGGACACAAGAAGGATAAAA
GGTGCGGCTGGAACATGGACTTCAAAGACAGAAGCCTAG

Translation (152 aa):
MAVALPEVVEELLSEMAAAVRDSARIPDELLLSLEFVFGSSAIQALDLVDRESVTLISSPSGRRVYQVLG
SSGKTYTCLASCHYCSCPAFSFSVLRKSDSLLCKHLLAIYLSQLLRNCQQLHVSDKQLTDLLMEDTRRIK
GAAGTWTSKTEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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