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Report for CCDS4894.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4894.2 Public Homo sapiens 6 CRIP3 24 110 108 CCDS HistoryNCBI Gene:401262Re-query CCDS DB by CCDS ID:4894.2Re-query CCDS DB by GeneID:401262See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 4894.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372569.8 ENSP00000361650.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372569.8Link to Ensembl Protein Viewer:ENSP00000361650.3Re-query CCDS DB by Nucleotide ID:ENST00000372569Re-query CCDS DB by Protein ID:ENSP00000361650
Original member Current member NCBI NM_206922.3 NP_996805.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_206922.3Link to Protein Sequence:NP_996805.2Re-query CCDS DB by Nucleotide ID:NM_206922Re-query CCDS DB by Protein ID:NP_996805Link to BLAST:NP_996805.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996805.2 204 Q6Q6R5-3 204 100% 0 0

Chromosomal Locations for CCDS 4894.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 43305814 43305875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43306067 43306124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43306219 43306313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43306446 43306517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43307612 43307743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43307839 43307896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43308315 43308409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43308750 43308792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (615 nt):
ATGAGCTGGACCTGTCCGCGTTGCCAGCAACCTGTTTTCTTCGCTGAGAAGGTGAGCTCCCTGGGCAAGA
ACTGGCACCGCTTCTGCCTGAAATGTGAGCGCTGCCACAGCATCCTGTCCCCTGGCGGGCATGCAGAGCA
CAATGGGAGGCCATACTGCCACAAGCCATGCTATGGGGCTCTCTTTGGACCCAGGGGGGTGAACATTGGT
GGTGTAGGCTCCTACTTGTACAATCCCCCCACTCCCAGCCCTGGCTGCACCACTCCTCTCAGCCCCAGCA
GCTTCAGCCCTCCCAGGCCAAGGACTGGCCTCCCCCAAGGCAAGAAAAGCCCTCCCCATATGAAGACATT
CACTGGGGAGACCTCGCTGTGCCCTGGCTGTGGGGAGCCCGTCTATTTTGCTGAGAAGGTGATGTCATTA
GGCAGAAATTGGCACCGACCGTGTCTGAGGTGCCAGCGTTGCCACAAGACCCTGACTGCTGGGAGTCATG
CTGAGCATGATGGAGTCCCCTACTGCCACGTCCCCTGCTACGGCTACCTGTTTGGCCCCAAAGGTGTGAA
CATTGGCGATGTGGGCTGCTACATCTATGACCCAGTGAAGATAAAATTCAAATGA

Translation (204 aa):
MSWTCPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCYGALFGPRGVNIG
GVGSYLYNPPTPSPGCTTPLSPSSFSPPRPRTGLPQGKKSPPHMKTFTGETSLCPGCGEPVYFAEKVMSL
GRNWHRPCLRCQRCHKTLTAGSHAEHDGVPYCHVPCYGYLFGPKGVNIGDVGCYIYDPVKIKFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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