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Report for CCDS4981.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4981.1 Public Homo sapiens 6 SLC17A5 24 110 108 CCDS HistoryNCBI Gene:26503Re-query CCDS DB by CCDS ID:4981.1Re-query CCDS DB by GeneID:26503See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4981.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355773.6 ENSP00000348019.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000355773.6Link to Ensembl Protein Viewer:ENSP00000348019.5Re-query CCDS DB by Nucleotide ID:ENST00000355773Re-query CCDS DB by Protein ID:ENSP00000348019
Original member Current member NCBI NM_012434.5 NP_036566.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012434.5Link to Protein Sequence:NP_036566.1Re-query CCDS DB by Nucleotide ID:NM_012434Re-query CCDS DB by Protein ID:NP_036566Link to BLAST:NP_036566.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036566.1 495 Q9NRA2-1 495 100% 0 0

Chromosomal Locations for CCDS 4981.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 73595077 73595214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 73600351 73600441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 73610400 73610547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 73615315 73615447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 73621804 73621962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 73635382 73635500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 73636621 73636707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 73638412 73638499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 73641691 73641924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 73644407 73644603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 73653793 73653886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1488 nt):
ATGAGGTCTCCGGTTCGAGACCTGGCCCGGAACGATGGCGAGGAGAGCACGGACCGCACGCCTCTTCTAC
CGGGCGCCCCACGGGCCGAAGCCGCTCCAGTGTGCTGCTCTGCTCGTTACAACTTAGCAATTTTGGCCTT
TTTTGGTTTCTTCATTGTGTATGCATTACGTGTGAATCTGAGTGTTGCGTTAGTGGATATGGTAGATTCA
AATACAACTTTAGAAGATAATAGAACTTCCAAGGCGTGTCCAGAGCATTCTGCTCCCATAAAAGTTCATC
ATAATCAAACGGGTAAGAAGTACCAATGGGATGCAGAAACTCAAGGATGGATTCTCGGTTCCTTTTTTTA
TGGCTACATCATCACACAGATTCCTGGAGGATATGTTGCCAGCAAAATAGGGGGGAAAATGCTGCTAGGA
TTTGGGATCCTTGGCACTGCTGTCCTCACCCTGTTCACTCCCATTGCTGCAGATTTAGGAGTTGGACCAC
TCATTGTACTCAGAGCACTAGAAGGACTAGGAGAGGGTGTTACATTTCCAGCCATGCATGCCATGTGGTC
TTCTTGGGCTCCCCCTCTTGAAAGAAGCAAACTTCTTAGCATTTCATATGCAGGAGCACAGCTTGGGACA
GTAATTTCTCTTCCTCTTTCTGGAATAATTTGCTACTATATGAATTGGACTTATGTCTTCTACTTTTTTG
GTACTATTGGAATATTTTGGTTTCTTTTGTGGATCTGGTTAGTTAGTGACACACCACAAAAACACAAGAG
AATTTCCCATTATGAAAAGGAATACATTCTTTCATCATTAAGAAATCAGCTTTCTTCACAGAAGTCAGTG
CCGTGGGTACCCATTTTAAAATCCCTGCCACTTTGGGCTATCGTAGTTGCACACTTTTCTTACAACTGGA
CTTTTTATACTTTATTGACATTATTGCCTACTTATATGAAGGAGATCCTAAGGTTCAATGTTCAAGAGAA
TGGGTTTTTATCTTCATTGCCTTATTTAGGCTCTTGGTTATGTATGATCCTGTCTGGTCAAGCTGCTGAC
AATTTAAGGGCAAAATGGAATTTTTCAACTTTATGTGTTCGCAGAATTTTTAGCCTTATAGGAATGATTG
GACCTGCAGTATTCCTGGTAGCTGCTGGCTTCATTGGCTGTGATTATTCTTTGGCCGTTGCTTTCCTAAC
TATATCAACAACACTGGGAGGCTTTTGCTCTTCTGGATTTAGCATCAACCATCTGGATATTGCTCCTTCG
TATGCTGGTATCCTCCTGGGCATCACAAATACATTTGCCACTATTCCAGGAATGGTTGGGCCCGTCATTG
CTAAAAGTCTGACCCCTGATAACACTGTTGGAGAATGGCAAACCGTGTTCTATATTGCTGCTGCTATTAA
TGTTTTTGGTGCCATTTTCTTTACACTATTCGCCAAAGGTGAAGTACAAAACTGGGCTCTCAATGATCAC
CATGGACACAGACACTGA

Translation (495 aa):
MRSPVRDLARNDGEESTDRTPLLPGAPRAEAAPVCCSARYNLAILAFFGFFIVYALRVNLSVALVDMVDS
NTTLEDNRTSKACPEHSAPIKVHHNQTGKKYQWDAETQGWILGSFFYGYIITQIPGGYVASKIGGKMLLG
FGILGTAVLTLFTPIAADLGVGPLIVLRALEGLGEGVTFPAMHAMWSSWAPPLERSKLLSISYAGAQLGT
VISLPLSGIICYYMNWTYVFYFFGTIGIFWFLLWIWLVSDTPQKHKRISHYEKEYILSSLRNQLSSQKSV
PWVPILKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENGFLSSLPYLGSWLCMILSGQAAD
NLRAKWNFSTLCVRRIFSLIGMIGPAVFLVAAGFIGCDYSLAVAFLTISTTLGGFCSSGFSINHLDIAPS
YAGILLGITNTFATIPGMVGPVIAKSLTPDNTVGEWQTVFYIAAAINVFGAIFFTLFAKGEVQNWALNDH
HGHRH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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