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Report for CCDS50059.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50059.1 Public Mus musculus 17 Cyp4f17 23 108 98 CCDS HistoryNCBI Gene:208285Re-query CCDS DB by CCDS ID:50059.1Re-query CCDS DB by GeneID:208285See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50059.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000165999.1 ENSMUSP00000129514.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000165999.1Link to Ensembl Protein Viewer:ENSMUSP00000129514.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000165999Re-query CCDS DB by Protein ID:ENSMUSP00000129514
Original member Current member EBI ENSMUST00000237003.1 ENSMUSP00000157447.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000237003.1Link to Ensembl Protein Viewer:ENSMUSP00000157447.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000237003Re-query CCDS DB by Protein ID:ENSMUSP00000157447
Original member Current member NCBI NM_001101445.2 NP_001094915.1 Accepted alive Link to Nucleotide Sequence:NM_001101445.2Link to Protein Sequence:NP_001094915.1Re-query CCDS DB by Nucleotide ID:NM_001101445Re-query CCDS DB by Protein ID:NP_001094915Link to BLAST:NP_001094915.1

Chromosomal Locations for CCDS 50059.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 32506895 32507092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32517894 32518038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32520363 32520416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32520503 32520630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32522118 32522239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32524002 32524272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32524579 32524645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32524835 32524964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32527841 32527974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32528047 32528111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32528276 32528358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32528717 32528894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1575 nt):
ATGCTACAGCTGGGCCTGTCCTGGCTGGGACTGGGGCCTGGAGCTGCCTTCCCATGGCAACTTCTGCAGT
TGGTTGGGGCCTCCTTGTTCCTGGCTCGAATTCTGACCTGGATTTGTGCCTTCTATGACAACTACTGCCG
TCTCCGCTGCTTCCCCGAGCCCCCTTCGCGGCACTGGTTTTGGGGTCACATGAGCATGGTCAAGAACAAC
GAGGAAGGCCTGCAGTTGTTGACTGAAAGGAGCCACCAATTCCATGATGTCCACCTCTGTTGGATTGGGC
CCTTCTACCCCATCCTGAGGCTTATCCACCCCAAGTTTATTGGCCCCATACTCCAGGCCTCAGCTGCGGT
GGCCCCTAAGGAAATGATTTTCTATGGCTTCCTGAAGCCCTGGCTGGGGGATGGACTGTTGGTGAGTGCT
GGTGAGAAATGGAGCCGCCACCGCCACCTGCTGACACCTGCATTCCACTTTGACATCCTGAAGCCCTATA
TGAAAAATTTTAATAAGAGTGTGAACATCATGCATGCCAAGTGGCAGCGTCTGACCACCAAAGGAACTGC
CTGTCTGGACATGTTGGAACACATCAGTCTGATGACCTTGGACAGCTTGCAGAACTGTGTGTTCAGCTTT
GACAGCAACTGTCAGGAGTCTCCCAGTGAATATATTGCTGCTATTCAGGAGCTCAGCTCCCTCATAGTGA
AACGGCACCACCAGCCCTTCCTGTACCTTGACTTCCTGTATTACTGCACTGCTGATGGGCGGCGCTTCCG
CAAGGCCTGCGACCTGGTGCACAACTTCACAGATGCTGTCATCAGGGAGAGACGGCGCACTCTCTCCAGC
CAAAATCTTGATGAGTTCCTGAAGTCGAAGACTAAGTCTAAAACCCTGGACTTCATCGATGTGCTCTTAT
TGGCCAAGGATGAACATGGAAAGGAGCTGTCAGATGAGGACATCCGAGCGGAGGCTGACACCTTCATGTT
TGGAGGCCATGACACCACAGCCAGTGCACTCTCCTGGATCCTGTACAACCTGGCGAGGCACCCCGAATAC
CAGGAGCGCTGCCGGCAGGAGGTTCAAGAGCTGCTGAGGGGCCGAGAGCCCCAGGAGATTGAATGGGACG
ACCTGGCCCAGCTGCCCTTCCTGACCATGTGCATCAAGGAGAGTCTGCGGCTGCACCCCCCAGTTACGGT
CATTTCCCGTTGCTGCACCCAAGACGTTGTGCTTCCAGATGGCCGGGTCATCCCTAAAGGAACCGACTGT
GTCATCAGCATCTTCGGGGTTCATCACAACCCTGAAGTCTGGCCAGACCCTGAGGTCTATGACCCCTTCC
GCTTCGACCCAGAAAACCCACAGAAGAGGTCTCCTCTGGCTTTTATTCCCTTTTCTGCTGGGCCTAGGAA
CTGCATAGGACAGACTTTCGCCATGAGGGAGATGAAGGTGGCACTGGCGCTGACTCTGCTGCGCTTCCGC
GTCCTGCCAGGTGACAAGGAGCCTCGCCGGAAGCCAGAGCTGATCCTGCGCGCAGAGGGCGGGCTGTGGC
TGCGGGTGGAGCCTCTGAGCAAGGGCACTCAGTGA

Translation (524 aa):
MLQLGLSWLGLGPGAAFPWQLLQLVGASLFLARILTWICAFYDNYCRLRCFPEPPSRHWFWGHMSMVKNN
EEGLQLLTERSHQFHDVHLCWIGPFYPILRLIHPKFIGPILQASAAVAPKEMIFYGFLKPWLGDGLLVSA
GEKWSRHRHLLTPAFHFDILKPYMKNFNKSVNIMHAKWQRLTTKGTACLDMLEHISLMTLDSLQNCVFSF
DSNCQESPSEYIAAIQELSSLIVKRHHQPFLYLDFLYYCTADGRRFRKACDLVHNFTDAVIRERRRTLSS
QNLDEFLKSKTKSKTLDFIDVLLLAKDEHGKELSDEDIRAEADTFMFGGHDTTASALSWILYNLARHPEY
QERCRQEVQELLRGREPQEIEWDDLAQLPFLTMCIKESLRLHPPVTVISRCCTQDVVLPDGRVIPKGTDC
VISIFGVHHNPEVWPDPEVYDPFRFDPENPQKRSPLAFIPFSAGPRNCIGQTFAMREMKVALALTLLRFR
VLPGDKEPRRKPELILRAEGGLWLRVEPLSKGTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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