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Report for CCDS50176.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50176.1 Public Mus musculus 17 Myom1 23 108 98 CCDS HistoryNCBI Gene:17929Re-query CCDS DB by CCDS ID:50176.1Re-query CCDS DB by GeneID:17929See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50176.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000179759.2 ENSMUSP00000136266.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000179759.2Link to Ensembl Protein Viewer:ENSMUSP00000136266.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000179759Re-query CCDS DB by Protein ID:ENSMUSP00000136266
Original member NCBI NM_001083934.1 NP_001077403.1 Updated not alive Link to Nucleotide Sequence:NM_001083934.1Link to Protein Sequence:NP_001077403.1Re-query CCDS DB by Nucleotide ID:NM_001083934Re-query CCDS DB by Protein ID:NP_001077403
Current member NCBI NM_001083934.2 NP_001077403.1 Accepted alive Link to Nucleotide Sequence:NM_001083934.2Link to Protein Sequence:NP_001077403.1Re-query CCDS DB by Nucleotide ID:NM_001083934Re-query CCDS DB by Protein ID:NP_001077403Link to BLAST:NP_001077403.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001077403.1 1569 Q62234-2 1569 100% 0 0

Chromosomal Locations for CCDS 50176.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 71022875 71023197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71034571 71034711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71036274 71036523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71037216 71037373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71044486 71044578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71045544 71045632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71045737 71045796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71047724 71047888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71052614 71052775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71061125 71061266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71064448 71064647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71067313 71067369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71072083 71072207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71077257 71077440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71077765 71077939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71080774 71080895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71084238 71084434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71087444 71087570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71089823 71090007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71092100 71092214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71099954 71100110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71100994 71101100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71101224 71101268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71105463 71105599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71106204 71106348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71108301 71108360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71108626 71108693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71109727 71109840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71110707 71110794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71111811 71111849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71111944 71112049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71117294 71117457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71120646 71120682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71121126 71121148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71122557 71122612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 71126076 71126369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4710 nt):
ATGTCTCTGCCCTTTTATCAGCGGTCCCATCAGCACTATGATCTCAGTTACCGGAACAAGGACCTTCGCA
CGACCATGAGCCACTACCAACAGGAGAAGAAGCGCTCTGCTGTCTACACCCATGGCTCCACTGCCTACAG
CAGCCGCTCCTTGGCAGCACGCCGCCAGGAGTCAGAGGCCTTCAGTCAAGCATCAGCCACCTCTTACCAG
CAGCAGGCCTCACAGACCTACAGTCTTGGAGCATCATCATCATCCCGGCATTCTCAAGGGTCTGAAGTCA
GCCGGAAGACAGCCTCTGCATATGATTACGGCTATTCCCACGGACTCACAGATTCCAGTCTGCTATTAGA
AGATTATTCATCCAAGTTGAGCCCCCAAACAAAGAGAGCCAAGCGGAGCCTTCTGTCTGGAGAGGAGACT
GGAAGCTTGCCAGGCAACTACCTGGTGCCTATCTACTCTGGACGGCAAGTGCACATCAGTGGGATCAGAG
ACTCGGAAGAAGAAAGAATTAAAGAGGCTGCTGCTTATATCGCTCAGAAGACTCTCCTTGCGAGTGAGGA
AGCTATTGCAGCTTCCAAACAGAGCACAGCCTCCAAACAGTCCGCAACCTCCAAACGGACCACGTCCACC
CTTCAACGAGAGGAAACGTTTGAAAAGAAGTCGAGGAACATTGCAATTCGAGAAAAGGCGGAAGAGCTGT
CACTGAAGAAAACATTAGAAGAGACCCAAACATATCACGGCAAGCTAAATGAAGACCATCTCCTTCATGC
TCCTGAGTTTATCATTAAGCCTCGTTCTCACACAGTTTGGGAGAAGGAGAATGTGAAGTTGCACTGCTCT
GTAGCAGGGTGGCCAGAGCCTCGGCTCACGTGGTATAAGAACCAGGTGCCTATAAATGTCCATGCAAACC
CGGGAAAGTACATCATTGAAAGCCGATACGGAATGCATACTCTTGAGATCAGCAAATGTGACTTTGAAGA
CACAGCTCAGTACCGGGCCTCGGCGATGAATGTTCAAGGAGAGCTGTCAGCATATGCCTCAGTCGTAGTA
AAGAGATATAAGGGAGAACTGGATGAGTCTCTCCTCCGTGGTGGGGTTTCCATGCCTCTCAGCTTTGCTG
TGACCCCTTACGGTTATGCATCCAAGTTTGAGATCCACTTCGATGACAAGTTTGATGTGTCTTTTGGGAG
AGAAGGAGAGACCATGAGTCTGGGCTGTCGCGTAGTCATCACTCCTGAGATAAAGCACTTTCAGCCCGAG
GTCCAGTGGTATAGAAATGGAGCACCTGTTTCTCCATCAAAATGGGTGCAGCCACACTGGAGTGGAGACC
GGGCGACACTTACGTTCTCTCACCTCAACAAAGAAGATGAAGGTCTCTACACGATCCGAGTGCGAATGGG
AGAGTATTACGAACAGTACAGTGCTTACGTCTTTGTTCGAGATGCTGATGCAGAGATCGAAGGAGCCCCA
GCTGCACCCTTGGATGTGGTGTCTTTGGATGCTAACAAGGATTACATCATCATCTCTTGGAAGCAGCCAG
CTGTGGATGGAGGGAGCCCTATCCTGGGATACTTTATCGATAAGTGTGAGGTGGGCACAGATACCTGGTC
TCAGTGCAATGACACACCTGTGAAGTTTGCTCGGTTTCCAGTCACTGGCTTGATAGAAGGCCGTTCCTAC
ATATTCAGAGTCCGAGCTGTGAATAAAACTGGAATAGGCCTGCCATCCCGAGTTTCTGAGCCTGTGGCGG
CTTTGGATCCAGCTGAGAAAGCTAGACTAAAAAGTCATCCTTCAGCACCCTGGACTGGACAGATCATTGT
CACGGAAGAAGAGCCTACAGAGGGTGTCATTCCTGGCCCCCCCACAGACCTCTCTGTCACCGAGGCCACC
CGGAGCTACGTAGTGCTGAGCTGGAAACCCCCTGGGCAGCGAGGCCATGAGGGCATTATGTATTTTGTAG
AAAAGTGTGATGTGGGAGCAGAAAACTGGCAGCGGGTCAACACAGAACTCCCGGTGAAGTCTCCTCGCTT
TGCTCTGTTTGACCTGGTGGAGGGGAAGTCTTACCGCTTCCGTGTCCGCTGCTCAAATTCAGCAGGAGTT
GGTGAGCCCTCAGAAACGACTGAAGTGACCGTCGTAGGGGACAAACTTGATATCCCAAAGGCCCCTGGCA
AAATCATCCCAAGTAGAAATACAGATACCTCAGTGGTGGTATCTTGGGAGGAGTCCAGAGACGCCAAGGA
ACTGGTTGGGTACTACATCGAGGCCAGTGTCGTTGGCTCTGGCAAGTGGGAACCCTGCAATAACAACCCG
GTGAAGGGCTCACGATTTACTTGTCATGGACTGACGACTGCTCAGAGCTATATTTTCCGGGTCAGAGCAG
TGAATGCAGCTGGACTTAGCGAATATTCACAGGATTCGGAAGCTATTGAAGTCAAAGCTGCTATCGCCGT
GCCATCTGCGCCCTATGACATCACTTGTCTTGAAAGTTTTCGGGACTCCATGGTTCTTGGATGGAAGCAG
CCAGATACGACCGGAGGGGCAGAGATTACAGGCTATTATGTGAACTATCGTGAGGTGGTTGGTGAGGTAC
CAGGAAAATGGAGGGAAGCTAACATCAAGGCCGTCAGCGATGCAGCGTACAAGATTAGCAACTTGAAGGA
AAACACACTGTACCAGTTCCAAGTGTCAGCAATGAACATTGCAGGGCTGGGAGCGCCCTCCACGGTGAGC
GAGTGCTTCAAGTGTGAAGAGTGGACCATTGCTGTTCCAGGACCACCACACAGCGTGAAGCTCAGTGAAG
TCAGGAAGAACTCCCTGGTTCTCCAGTGGAAGCCTCCAGTCTACTCAGGCCGGACTCCAGTCACGGGTTA
CTTTGTGGACCTGAAGGAAGCCAGTGCCAAAGATGACCAATGGCGAGGACTTAATGAGGCAGCCATTGTG
AACAAGTACCTGAGGGTGCAAGGCCTCAAAGAGGGTACCAGCTACGTGTTCCGTGTACGTGCTGTCAACC
AGGCAGGCGTTGGAAAGCCTTCAGACCTTGCTGGACCTGTTGTGGCTGAAACACGTCCAGGCACCAAAGA
GGTTGTGGTGAGTGTGGATGATGACGGAGTCATTTCCTTGAACTTTGAATGTGATCAGATGACTCCCAAG
TCAGAATTCGTCTGGTCCAAAGATTATGTACCTACTGAAGACTCTCCACGATTAGAAGTCGAAAACAAAG
GCGATAAGACAAAAATGACCTTTAAAGACCTCGGGACAGATGATTTGGGCACCTATTCTTGTGATGTGAC
AGACACGGATGGGATAGCGTCAAGCTACCTGATAGACGAGGAGGAAATGAAACGTCTGCTTGCCCTCAGC
CAGGAGCACAAGTTCCCGACTGTCCCAACTAAGTCTGAGTTGGCAGTTGAAATTTTGGAGAAAGGTCAGG
TCCGGTTTTGGATGCAGGCTGAGAAGCTGTCTAGCAATGCCAAAGTCAGCTACATATTTAACGAGAAGGA
AATTTTCGAGGGGCCGAAATACAAGATGCACATAGACCGAAACACGGGCATCATTGAAATGTTCATGGAG
AAGCTACAGGACGAGGATGAAGGGACGTACACATTCCAAATTCAAGATGGAAAAGCAACTGGCCATTCGA
CTCTTGTTCTCATTGGAGACGTTTATAAGAAGCTACAGAAAGAAGCTGAATTCCAGCGACAAGAATGGAT
CAGGAAGCAAGGCCCACATTTCGCTGAGTATTTGAGCTGGGAAGTGACTGGTGAATGTAACGTGCTGTTG
AAATGCAAGGTGGCAAATATTAAAAAAGAGACTCACATTGTATGGTACAAAGATGAACGGGAGATCTCCG
TGGACGAGAAACATGACTTTAAGGATGGCATTTGTACCCTGCTCATCACAGAGTTTTCCAAGAAAGACGC
TGGATTTTATGAAGTTATCCTGAAAGATGACCGAGGAAAAGATAAGAGCAGATTGAAGCTCGTGGATGAA
GCCTTCCAAGACTTGATGACTGAAGTATGCAAGAAGATAGCGTTGTCTGCCACAGACCTGAAAATCCAGA
GCACAGCGGAGGGCATCCGGCTATACTCCTTTGTCTGTTATTACCTGGATGACTTGAAAGTTAACTGGTC
CCACAATGGGACGGGGATTAAGTACACAGACAGAGTCAAGAGTGGCGTGACTGGGGAGCAGATCTGGCTG
CAGATCAACGAGCCCACTCCGAATGATAAAGGGAAATACGTGATGGAGCTCTTTGACGGCAAGACTGGAC
ACCAGAAGACGGTGGATCTCTCTGGACAAGCATTTGATGAGGCCTTTGCTGAATTCCAGAGGTTAAAACA
AGCTGCCATTGCTGAAAAAAATCGGGCCCGGGTGTTAGGTGGTCTCCCTGATGTTGTCACCATTCAAGAG
GGCAAGGCACTCAATCTCACTTGCAATGTGTGGGGTGACCCGCCCCCTGAGGTGTCCTGGCTGAAAAACG
AGAAGCCACTGACCTCTGACGACCACTGCAGCCTCAAGTTTGAGGCCGGGAAAACCGCCTTCTTCACCAT
CTCAGGCGTGAGCACGGCAGACTCCGGCAAGTACGGGCTGGTGGTGAAGAACAAATATGGCTCGGAGACC
AGCGACTTCACCGTTAGTGTGTTCATCCCAGAGGAGGAGTTGAGGAAGGGAGCAATGGAGCCTCCCAAGG
GCAACCAGAAGTCCAAGTGA

Translation (1569 aa):
MSLPFYQRSHQHYDLSYRNKDLRTTMSHYQQEKKRSAVYTHGSTAYSSRSLAARRQESEAFSQASATSYQ
QQASQTYSLGASSSSRHSQGSEVSRKTASAYDYGYSHGLTDSSLLLEDYSSKLSPQTKRAKRSLLSGEET
GSLPGNYLVPIYSGRQVHISGIRDSEEERIKEAAAYIAQKTLLASEEAIAASKQSTASKQSATSKRTTST
LQREETFEKKSRNIAIREKAEELSLKKTLEETQTYHGKLNEDHLLHAPEFIIKPRSHTVWEKENVKLHCS
VAGWPEPRLTWYKNQVPINVHANPGKYIIESRYGMHTLEISKCDFEDTAQYRASAMNVQGELSAYASVVV
KRYKGELDESLLRGGVSMPLSFAVTPYGYASKFEIHFDDKFDVSFGREGETMSLGCRVVITPEIKHFQPE
VQWYRNGAPVSPSKWVQPHWSGDRATLTFSHLNKEDEGLYTIRVRMGEYYEQYSAYVFVRDADAEIEGAP
AAPLDVVSLDANKDYIIISWKQPAVDGGSPILGYFIDKCEVGTDTWSQCNDTPVKFARFPVTGLIEGRSY
IFRVRAVNKTGIGLPSRVSEPVAALDPAEKARLKSHPSAPWTGQIIVTEEEPTEGVIPGPPTDLSVTEAT
RSYVVLSWKPPGQRGHEGIMYFVEKCDVGAENWQRVNTELPVKSPRFALFDLVEGKSYRFRVRCSNSAGV
GEPSETTEVTVVGDKLDIPKAPGKIIPSRNTDTSVVVSWEESRDAKELVGYYIEASVVGSGKWEPCNNNP
VKGSRFTCHGLTTAQSYIFRVRAVNAAGLSEYSQDSEAIEVKAAIAVPSAPYDITCLESFRDSMVLGWKQ
PDTTGGAEITGYYVNYREVVGEVPGKWREANIKAVSDAAYKISNLKENTLYQFQVSAMNIAGLGAPSTVS
ECFKCEEWTIAVPGPPHSVKLSEVRKNSLVLQWKPPVYSGRTPVTGYFVDLKEASAKDDQWRGLNEAAIV
NKYLRVQGLKEGTSYVFRVRAVNQAGVGKPSDLAGPVVAETRPGTKEVVVSVDDDGVISLNFECDQMTPK
SEFVWSKDYVPTEDSPRLEVENKGDKTKMTFKDLGTDDLGTYSCDVTDTDGIASSYLIDEEEMKRLLALS
QEHKFPTVPTKSELAVEILEKGQVRFWMQAEKLSSNAKVSYIFNEKEIFEGPKYKMHIDRNTGIIEMFME
KLQDEDEGTYTFQIQDGKATGHSTLVLIGDVYKKLQKEAEFQRQEWIRKQGPHFAEYLSWEVTGECNVLL
KCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGFYEVILKDDRGKDKSRLKLVDE
AFQDLMTEVCKKIALSATDLKIQSTAEGIRLYSFVCYYLDDLKVNWSHNGTGIKYTDRVKSGVTGEQIWL
QINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAFDEAFAEFQRLKQAAIAEKNRARVLGGLPDVVTIQE
GKALNLTCNVWGDPPPEVSWLKNEKPLTSDDHCSLKFEAGKTAFFTISGVSTADSGKYGLVVKNKYGSET
SDFTVSVFIPEEELRKGAMEPPKGNQKSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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