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Report for CCDS5077.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5077.1 Public Homo sapiens 6 AK9 24 110 108 CCDS HistoryNCBI Gene:221264Re-query CCDS DB by CCDS ID:5077.1Re-query CCDS DB by GeneID:221264See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5077.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000285397.9 ENSP00000285397.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000285397.9Link to Ensembl Protein Viewer:ENSP00000285397.4Re-query CCDS DB by Nucleotide ID:ENST00000285397Re-query CCDS DB by Protein ID:ENSP00000285397
Original member Current member NCBI NM_001329602.2 NP_001316531.1 Accepted alive Link to Nucleotide Sequence:NM_001329602.2Link to Protein Sequence:NP_001316531.1Re-query CCDS DB by Nucleotide ID:NM_001329602Re-query CCDS DB by Protein ID:NP_001316531Link to BLAST:NP_001316531.1
Original member Current member NCBI NM_145025.5 NP_659462.1 Accepted alive Link to Nucleotide Sequence:NM_145025.5Link to Protein Sequence:NP_659462.1Re-query CCDS DB by Nucleotide ID:NM_145025Re-query CCDS DB by Protein ID:NP_659462Link to BLAST:NP_659462.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001316531.1 421 Q5TCS8-2 421 100% 0 0
NP_659462.1 421 Q5TCS8-2 421 100% 0 0

Chromosomal Locations for CCDS 5077.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 109632911 109633103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 109633184 109633323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 109641518 109641616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 109644614 109644688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 109656756 109656884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 109659228 109659413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 109662551 109662663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 109671919 109672015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 109672115 109672167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 109674198 109674261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 109675629 109675745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1266 nt):
ATGACTTCTCAAGAGAAGACAGAAGAGTATCCTTTTGCAGATATATTTGATGAAGATGAAACTGAAAGGA
ATTTTTTGTTGTCCAAACCTGTTTGCTTTGTTGTATTTGGGAAACCAGGTGTTGGGAAAACAACATTAGC
CCGTTACATAACACAGGCATGGAAATGTATTCGTGTTGAAGCTTTGCCAATTTTAGAAGAACAGATTGCT
GCTGAAACCGAATCAGGAGTTATGTTGCAATCAATGTTGATCAGCGGTCAAAGCATTCCAGATGAACTTG
TCATAAAGCTAATGTTGGAGAAGCTCAACTCCCCAGAAGTCTGTCACTTTGGTTATATTATCACTGAAAT
ACCATCACTTTCACAGGATGCCATGACTACCTTACAGCAAATAGAATTAATTAAAAACTTAAACCTGAAA
CCTGATGTTATAATCAATATAAAGTGTCCTGACTATGATTTGTGCCAGAGAATTTCTGGGCAAAGACAGC
ACAATAATACGGGATACATATACAGTAGAGACCAGTGGGATCCTGAAGTCATTGAGAATCATAGGAAAAA
GAAGAAAGAAGCCCAAAAGGACGGAAAAGGAGAAGAGGAAGAAGAGGAAGAAGAGCAAGAAGAAGAAGAG
GCATTTATTGCCGAAATGCAGATGGTGGCTGAAATTCTTCATCATCTAGTTCAGAGGCCTGAAGATTATT
TGGAAAATGTTGAAAACATTGTTAAGCTTTATAAGGAAACAATTCTCCAAACTTTAGAAGAAGTAATGGC
TGAACACAATCCCCAGTATCTCATTGAGCTAAATGGAAATAAACCAGCAGAGGAGCTCTTTATGATTGTT
ATGGATCGACTTAAATATCTGAACCTAAAAAGAGCAGCTATTCTAACCAAACTTCAGGGTGCAGAGGAAG
AAATTAATGACACAATGGAAAATGATGAGCTATTTCGTACTCTTGCATCTTATAAACTTATTGCACCAAG
ATACAGATGGCAAAGAAGTAAATGGGGACGTACATGTCCTGTGAATTTAAAAGATGGTAACATTTATTCA
GGATTACCAGATTATTCTGTGAGTTTTCTAGGTAAAATCTACTGTCTTTCATCAGAAGAAGCATTAAAAC
CATTTTTGTTGAACCCACGTCCCTATCTGCTTCCACCTATGCCAGGACCACCATGTAAAGTATTCATACT
TGGACCTCAATATTCAGGGAAAACAACACTTTGCAATATGCTTGCAGAAAATTACAAAGGAAAGGTGACT
AACTAA

Translation (421 aa):
MTSQEKTEEYPFADIFDEDETERNFLLSKPVCFVVFGKPGVGKTTLARYITQAWKCIRVEALPILEEQIA
AETESGVMLQSMLISGQSIPDELVIKLMLEKLNSPEVCHFGYIITEIPSLSQDAMTTLQQIELIKNLNLK
PDVIINIKCPDYDLCQRISGQRQHNNTGYIYSRDQWDPEVIENHRKKKKEAQKDGKGEEEEEEEEQEEEE
AFIAEMQMVAEILHHLVQRPEDYLENVENIVKLYKETILQTLEEVMAEHNPQYLIELNGNKPAEELFMIV
MDRLKYLNLKRAAILTKLQGAEEEINDTMENDELFRTLASYKLIAPRYRWQRSKWGRTCPVNLKDGNIYS
GLPDYSVSFLGKIYCLSSEEALKPFLLNPRPYLLPPMPGPPCKVFILGPQYSGKTTLCNMLAENYKGKVT
N


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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