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Report for CCDS51325.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51325.1 Public Mus musculus 4 Zfp593 23 108 98 CCDS HistoryNCBI Gene:68040Re-query CCDS DB by CCDS ID:51325.1Re-query CCDS DB by GeneID:68040See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51325.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030644.7 ENSMUSP00000030644.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030644.7Link to Ensembl Protein Viewer:ENSMUSP00000030644.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000030644Re-query CCDS DB by Protein ID:ENSMUSP00000030644
Original member Current member NCBI NM_024215.2 NP_077177.2 Accepted alive Link to Nucleotide Sequence:NM_024215.2Link to Protein Sequence:NP_077177.2Re-query CCDS DB by Nucleotide ID:NM_024215Re-query CCDS DB by Protein ID:NP_077177Link to BLAST:NP_077177.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077177.2 134 Q9DB42 134 100% 0 0

Chromosomal Locations for CCDS 51325.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 134244789 134244930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 134245025 134245087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 134245304 134245503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (405 nt):
ATGGGTCGCTCTCGGCGGACCGGCGCGCACCGAGCACATTCCTTAGCCCGCCAGATGAAGGCCAAGAAGC
GGCGGCCGGACCTGGATGAGATTCATCGCGAGCTGAGGCCGCAGGGGCTCCCGCGGCCCAAGCCGGAGCC
GGACGCGGAGCCCGACCCGGACCTGCCAGGGGGCGGCCTGCATCGCTGTCTGGCTTGCGCGAGGTACTTC
ATCGATTCAGCCAACCTGAAGACCCATTTCCGATCCAAAGACCACAAGAAAAGGCTGAAGCAGCTGAGTG
TCGAACCCTACAGTCAGGAAGAAGCTGAGAGGGCAGCGGGCATGGGCTCGTATGTTCAACCCCAGCGGCT
GGGCGTGCCCACAGAAGTGTCCACTGATATCCCTGAGATGGACACGTCCACCTGA

Translation (134 aa):
MGRSRRTGAHRAHSLARQMKAKKRRPDLDEIHRELRPQGLPRPKPEPDAEPDPDLPGGGLHRCLACARYF
IDSANLKTHFRSKDHKKRLKQLSVEPYSQEEAERAAGMGSYVQPQRLGVPTEVSTDIPEMDTST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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