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Report for CCDS52413.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52413.1 Public Mus musculus 7 Fgfr2 23 108 98 CCDS HistoryNCBI Gene:14183Re-query CCDS DB by CCDS ID:52413.1Re-query CCDS DB by GeneID:14183See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52413.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000122054.7 ENSMUSP00000112430.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000122054.7Link to Ensembl Protein Viewer:ENSMUSP00000112430.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000122054Re-query CCDS DB by Protein ID:ENSMUSP00000112430
Original member Current member NCBI NM_010207.2 NP_034337.2 Accepted alive Link to Nucleotide Sequence:NM_010207.2Link to Protein Sequence:NP_034337.2Re-query CCDS DB by Nucleotide ID:NM_010207Re-query CCDS DB by Protein ID:NP_034337Link to BLAST:NP_034337.2

Chromosomal Locations for CCDS 52413.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 130163959 130164123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130167703 130167808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130169739 130169876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130171612 130171682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130172817 130172939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130177675 130177865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130180365 130180475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130182641 130182762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130185229 130185380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130196172 130196374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130198419 130198563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130200983 130201173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130218998 130219121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130228623 130228792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130241200 130241277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130242378 130242644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130261749 130261914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2523 nt):
ATGGGATTACCGTCCACGTGGAGATATGGAAGAGGACCAGGGATTGGCACTGTGACCATGGTCAGCTGGG
GGCGCTTCATCTGCCTGGTCTTGGTCACCATGGCAACCTTGTCCCTGGCCCGGCCCTCCTTCAGTTTAGT
TGAGGATACCACTTTAGAACCAGAAGAGCCACCAACCAAATACCAAATCTCCCAACCAGAAGCGTACGTG
GTTGCCCCCGGGGAATCGCTAGAGTTGCAGTGCATGTTGAAAGATGCCGCCGTGATCAGTTGGACTAAGG
ATGGGGTGCACTTGGGGCCCAACAATAGGACAGTGCTTATTGGGGAGTATCTCCAGATAAAAGGTGCCAC
ACCTAGAGACTCCGGCCTCTATGCTTGTACTGCAGCTAGGACGGTAGACAGTGAAACTTGGTACTTCATG
GTGAATGTCACAGATGCCATCTCATCTGGAGATGATGAGGACGACACAGATAGCTCCGAAGACGTTGTCA
GTGAGAACAGGAGCAACCAGAGAGCACCGTACTGGACCAACACCGAGAAGATGGAGAAGCGGCTCCACGC
TGTCCCTGCCGCCAACACTGTGAAGTTCCGCTGTCCGGCTGGGGGGAATCCAACGCCCACAATGAGGTGG
TTAAAAAACGGGAAGGAGTTTAAGCAGGAGCATCGCATTGGAGGCTATAAGGTACGAAACCAGCACTGGA
GCCTTATTATGGAAAGTGTGGTCCCGTCAGACAAAGGCAACTACACCTGCCTGGTGGAGAATGAATACGG
GTCCATCAACCACACCTACCACCTCGATGTCGTTGAACGGTCACCACACCGGCCCATCCTCCAAGCTGGA
CTGCCTGCAAATGCCTCCACGGTGGTCGGAGGGGATGTGGAGTTTGTCTGCAAGGTTTACAGCGATGCCC
AGCCCCACATCCAGTGGATCAAGCACGTGGAAAAGAACGGCAGTAAATACGGGCCTGATGGGCTGCCCTA
CCTCAAGGTCCTGAAGGCCGCCGGTGTTAACACCACGGACAAAGAGATTGAGGTTCTCTATATTCGGAAT
GTAACTTTTGAGGATGCTGGGGAATATACGTGCTTGGCGGGTAATTCTATCGGGATATCCTTTCACTCTG
CATGGTTGACAGTTCTGCCAGCGCCTGTGAGAGAGAAGGAGATCACGGCTTCCCCAGATTATCTGGAGAT
AGCTATTTACTGCATAGGGGTCTTCTTAATCGCCTGCATGGTGGTGACAGTCATCTTTTGCCGAATGAAG
ACCACGACCAAGAAGCCAGACTTCAGCAGCCAGCCAGCTGTGCACAAGCTGACCAAGCGCATCCCCCTGC
GGAGACAGGTAACAGTTTCGGCCGAGTCCAGCTCCTCCATGAACTCCAACACCCCGCTGGTGAGGATAAC
AACGCGTCTGTCCTCAACAGCGGACACCCCGATGCTAGCAGGGGTCTCCGAGTATGAGTTGCCAGAGGAT
CCAAAGTGGGAATTCCCCAGAGATAAGCTGACGCTGGGCAAACCCCTGGGGGAAGGTTGCTTCGGGCAAG
TAGTCATGGCTGAAGCAGTGGGAATCGATAAAGACAAACCCAAGGAGGCGGTCACCGTGGCAGTGAAGAT
GTTGAAAGATGATGCCACAGAGAAGGACCTGTCTGATCTGGTATCAGAGATGGAGATGATGAAGATGATT
GGGAAACATAAGAACATTATCAACCTCCTGGGGGCCTGCACGCAGGATGGACCTCTCTACGTCATAGTTG
AATATGCATCGAAAGGCAACCTCCGGGAATACCTCCGAGCCCGGAGGCCACCTGGCATGGAGTACTCCTA
TGACATTAACCGTGTCCCCGAGGAGCAGATGACCTTCAAGGACTTGGTGTCCTGCACCTACCAGCTGGCT
AGAGGCATGGAGTACTTGGCTTCCCAAAAATGTATCCATCGAGATTTGGCTGCCAGAAACGTGTTGGTAA
CAGAAAACAATGTGATGAAGATAGCAGACTTTGGCCTGGCCAGGGATATCAACAACATAGACTACTATAA
AAAGACCACAAATGGGCGACTTCCAGTCAAGTGGATGGCTCCTGAAGCCCTTTTTGATAGAGTTTACACT
CATCAGAGCGATGTCTGGTCCTTCGGGGTGTTAATGTGGGAGATCTTTACTTTAGGGGGCTCACCCTACC
CAGGGATTCCCGTGGAGGAACTTTTTAAGCTGCTCAAAGAGGGACACAGGATGGACAAGCCCACCAACTG
CACCAATGAACTGTACATGATGATGAGGGATTGCTGGCATGCTGTACCCTCACAGAGACCCACATTCAAG
CAGTTGGTCGAAGACTTGGATCGAATTCTGACTCTCACAACCAATGAGGAATACTTGGATCTCACCCAGC
CTCTCGAACAGTATTCTCCTAGTTACCCCGACACAAGGAGCTCTTGTTCTTCAGGGGACGATTCTGTGTT
TTCTCCAGACCCCATGCCTTATGAACCCTGTCTGCCTCAGTATCCACACATAAACGGCAGTGTTAAAACA
TGA

Translation (840 aa):
MGLPSTWRYGRGPGIGTVTMVSWGRFICLVLVTMATLSLARPSFSLVEDTTLEPEEPPTKYQISQPEAYV
VAPGESLELQCMLKDAAVISWTKDGVHLGPNNRTVLIGEYLQIKGATPRDSGLYACTAARTVDSETWYFM
VNVTDAISSGDDEDDTDSSEDVVSENRSNQRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPTPTMRW
LKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCLVENEYGSINHTYHLDVVERSPHRPILQAG
LPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTTDKEIEVLYIRN
VTFEDAGEYTCLAGNSIGISFHSAWLTVLPAPVREKEITASPDYLEIAIYCIGVFLIACMVVTVIFCRMK
TTTKKPDFSSQPAVHKLTKRIPLRRQVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAGVSEYELPED
PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI
GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLA
RGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT
HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPTNCTNELYMMMRDCWHAVPSQRPTFK
QLVEDLDRILTLTTNEEYLDLTQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPYEPCLPQYPHINGSVKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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