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Report for CCDS52637.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52637.1 Public Mus musculus 8 Adgrg5 23 108 98 CCDS HistoryNCBI Gene:382045Re-query CCDS DB by CCDS ID:52637.1Re-query CCDS DB by GeneID:382045See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52637.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000166802.8 ENSMUSP00000132628.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000166802.8Link to Ensembl Protein Viewer:ENSMUSP00000132628.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000166802Re-query CCDS DB by Protein ID:ENSMUSP00000132628
Original member Current member NCBI NM_001145972.1 NP_001139444.1 Accepted alive Link to Nucleotide Sequence:NM_001145972.1Link to Protein Sequence:NP_001139444.1Re-query CCDS DB by Nucleotide ID:NM_001145972Re-query CCDS DB by Protein ID:NP_001139444Link to BLAST:NP_001139444.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139444.1 524 Q3V3Z3-1 524 100% 0 0

Chromosomal Locations for CCDS 52637.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 94933366 94933429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94933496 94933571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94933875 94934031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94934461 94934580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94935050 94935166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94936360 94936512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94937221 94937342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94937573 94937841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94938541 94938658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94941505 94941782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94942032 94942132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1575 nt):
ATGGATCCACACGGCGCCCTTTTCTTCTACCTGTGCCTTCTGGCTGCTCAAGTTGTCCTAGTAGAAACCC
TGTCAGACCTACTTGTCTTGATGAAGCGCCTTGAGCAGCCCGTAGGCCGGGGCTTGTCTTCCAGAGCGAG
GCATATCCACAGCCTGGAGCAGAAGCTGCTCAATGCCAGCTTCGGCGGGCACAACTTGACCTTGCAGACA
AACTCCATCCAGTCTCTTGTCTTCAAGCTGAGCTGCGACTTTCCTGGTCTTTCCCTGTCCAGCACCACAC
TGACAAATGTCTCCCAGGTGCGAGCCCCACATGCCATGCAATTCCCTGCTGAGCTGACCAAGGGTGCCTG
TGTGACCTCCCGGCCTGCTGAGCTTCGACTCATCTGCATCTATTTCTTCACTGCACACCTCTTTCAGGAT
GACCGGAACTCATCACTGCTCAATAACTATGTCCTGGGGGCCCAGCTGGATCACAGGCCTGTGAACAACC
TTCAGAAGCCAGTCAACATCAGCTTCTGGCATAATCGGAGTCTGGAAGGGTATACAGTATCCTGTGTTTT
CTGGAAGGAGGGAGCCAGCAAGAGCAGCTGGGGGGCCTGGAGCCCTGAGGGCTGTTATACAGAGCAGCCC
TCAGCCACCCAGGTTCTCTGCCATTGCAACCATCTCACCTACTTCGCTGTGCTTATGCAGCTCTCTGGAG
ACCCCGTGCCCGCTGAGCTGCAGGTGCCTCTTGAGTACATCTCCTTTGTGGGTTGCAGCATCTCCATCGT
GGCCTCGCTGCTCACCATACTGCTGTACGCTCAGTCCAGGAAGCAAAGCGATTCCACCACACGTATCCAC
ATGAACCTGAATGGCTCTGTTCTGCTCCTGAACGTCACCTTCCTTCTGAGCTCCCAGATGACCCTGCCCA
CCATGCCCAGGCCCGTCTGCAAGGTGCTGGCTGCTGTCCTACACTACGCACTGCTCAGCAGCCTTACCTG
GATGGCCATCGAAGGCTTCAACCTCTACCTTTTCCTGGGGCGTGTCTACAACGCCTACATTCGCCGATAC
TTGCTCAAGCTCTGCATGCTGGGCTGGGGGTTTCCAGCCCTCTTGGTGCTGCTGCTTCTGATGATCAAGA
GCTCAGTGTATGGACCCTGTGTGACCTCACTCTCCAAAAGCCAGGAAAATGGCACAGGCTTCCAGAATGT
GTCCATGTGCTGGATCCGAAGTCCCATGGTACACAGCATCCTGGTCATGGGCTATGGTGGCTTCACATCT
CTGTTCAACCTGGTGGTGCTGGCCTGGGCTCTGTGGATCTTGTGCAGGCTTCGGGCACGGGAGAAGGCAC
TGAGTCCCTGGGCCTACCGGGACACTGCCATGGTGTTGGGTCTCACTGTGCTGCTTGGCACCACCTGGAC
CCTAGCCTTCTTCTCCTTCGGTGTGTTCCTGCTGCCTCAGCTCTTCCTCTTTACCATCTTCAACTCGCTC
TATGGTTTCTTCCTCTTCCTGTGGTTCTGCTCACAAAAGCGTTACTCGGATGCCGAAGCCAAGGCGGAGA
TGGAGGCAGTCAGCTCCTCCCAGATGACACACTGA

Translation (524 aa):
MDPHGALFFYLCLLAAQVVLVETLSDLLVLMKRLEQPVGRGLSSRARHIHSLEQKLLNASFGGHNLTLQT
NSIQSLVFKLSCDFPGLSLSSTTLTNVSQVRAPHAMQFPAELTKGACVTSRPAELRLICIYFFTAHLFQD
DRNSSLLNNYVLGAQLDHRPVNNLQKPVNISFWHNRSLEGYTVSCVFWKEGASKSSWGAWSPEGCYTEQP
SATQVLCHCNHLTYFAVLMQLSGDPVPAELQVPLEYISFVGCSISIVASLLTILLYAQSRKQSDSTTRIH
MNLNGSVLLLNVTFLLSSQMTLPTMPRPVCKVLAAVLHYALLSSLTWMAIEGFNLYLFLGRVYNAYIRRY
LLKLCMLGWGFPALLVLLLLMIKSSVYGPCVTSLSKSQENGTGFQNVSMCWIRSPMVHSILVMGYGGFTS
LFNLVVLAWALWILCRLRAREKALSPWAYRDTAMVLGLTVLLGTTWTLAFFSFGVFLLPQLFLFTIFNSL
YGFFLFLWFCSQKRYSDAEAKAEMEAVSSSQMTH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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