NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS5324.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5324.1 Public Homo sapiens 7 MICALL2 24 110 108 CCDS HistoryNCBI Gene:79778Re-query CCDS DB by CCDS ID:5324.1Re-query CCDS DB by GeneID:79778See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5324.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297508.8 ENSP00000297508.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297508.8Link to Ensembl Protein Viewer:ENSP00000297508.7Re-query CCDS DB by Nucleotide ID:ENST00000297508Re-query CCDS DB by Protein ID:ENSP00000297508
Original member Current member NCBI NM_182924.4 NP_891554.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182924.4Link to Protein Sequence:NP_891554.1Re-query CCDS DB by Nucleotide ID:NM_182924Re-query CCDS DB by Protein ID:NP_891554Link to BLAST:NP_891554.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_891554.1 904 Q8IY33-1 904 100% 0 0

Chromosomal Locations for CCDS 5324.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 1434596 1434672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1435101 1435147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1436742 1436856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1437535 1437608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1437890 1437980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1438097 1438220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1438289 1438353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1438840 1438995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1439925 1440085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1440591 1440684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1442192 1442484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1444652 1445428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1446713 1446828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1447575 1447765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1448620 1448761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1450240 1450288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1459184 1459326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2715 nt):
ATGGCGGCCATCAGGGCGCTGCAACAGTGGTGCCGGCAGCAGTGCGAGGGCTACCGCGACGTGAATATCT
GCAACATGACCACGTCGTTCCGCGACGGCCTGGCTTTCTGCGCCATCCTGCACCGCCACCGGCCCGACCT
CATAAACTTCAGTGCTCTCAAGAAGGAAAATATTTATGAAAACAATAAACTGGCCTTCCGCGTGGCCGAG
GAGCACTTGGGCATCCCAGCCTTGCTGGATGCCGAGGACATGGTGGCCTTGAAGGTGCCTGACCGGCTGA
GCATCTTGACCTACGTGTCCCAGTATTACAACTACTTCCACGGCCGCTCCCCCATTGGGGGCATGGCAGG
CGTGAAGAGGGCCTCGGAGGACTCTGAGGAGGAGCCGTCAGGGAAGAAGGCTCCAGTCCAGGCGGCCAAG
CTGCCCTCGCCCGCCCCAGCCCGGAAGCCTCCACTATCTCCAGCCCAGACAAACCCTGTGGTCCAGAGGA
GGAATGAGGGTGCAGGGGGCCCGCCCCCCAAGACTGACCAGGCATTGGCGGGCAGCTTGGTCAGCAGCAC
CTGCGGGGTCTGCGGCAAGCACGTGCACCTGGTACAGCGGCACCTGGCCGACGGGAGGCTTTACCACCGG
AGCTGCTTCAGGTGTAAGCAGTGCTCCTGCACGCTGCACTCGGGGGCCTACAAGGCCACAGGAGAGCCGG
GCACCTTCGTCTGCACCAGCCACCTCCCCGCAGCCGCCTCTGCAAGCCCCAAGTTGACGGGTCTGGTCCC
CCGACAGCCAGGGGCCATGGGTGTGGATTCCAGGACCTCCTGTTCCCCACAGAAGGCCCAGGAGGCAAAC
AAGGCCAGACCGTCGGCCTGGGAGCCTGCTGCGGGCAACTCGCCTGCCAGGGCTTCCGTTCCAGCTGCAC
CCAACCCTGCAGCCACCAGCGCCACGTCCGTCCACGTGAGGAGCCCAGCCAGGCCCTCTGAGAGCCGCCT
GGCCCCCACTCCCACGGAGGGGAAAGTCCGCCCTCGTGTGACCAATAGCTCCCCGATGGGCTGGTCGTCA
GCTGCCCCGTGCACAGCAGCGGCTGCCTCCCATCCCGCCGTGCCCCCGAGTGCCCCAGACCCTCGCCCGG
CCACACCCCAGGGTGGGGGAGCCCCCCGAGTGGCAGCTCCTCAAACCACACTCAGTTCAAGCTCCACATC
TGCAGCCACGGTGGACCCCCCAGCCTGGACCCCGTCCGCCTCCAGGACCCAGCAGGCCCGGAATAAGTTT
TTCCAAACATCAGCAGTGCCCCCCGGCACCAGCCTTTCTGGCAGAGGTCCCACCCCGTCACTTGTTCTAT
CCAAGGACAGCAGCAAGGAGCAGGCGCGGAACTTCCTCAAGCAGGCCCTCTCAGCGCTGGAAGAGGCTGG
CGCTCCGGCGCCTGGCAGGCCCTCCCCAGCCACTGCCGCTGTTCCCAGTTCTCAGCCCAAAACTGAAGCA
CCACAAGCAAGTCCCTTAGCCAAGCCGTTACAGTCCTCGTCTCCCCGGGTGCTTGGCCTCCCTTCGAGGA
TGGAACCGCCAGCCCCGCTGAGCACGAGCAGTACCTCTCAGGCATCCGCGTTGCCCCCGGCAGGCAGGAG
GAACTTGGCGGAATCCTCAGGGGTCGGCAGGGTGGGTGCTGGCTCCAGGCCGAAGCCAGAGGCCCCGATG
GCAAAGGGTAAAAGCACCACCTTAACGCAGGACATGAGCACCAGCCTCCAGGAAGGCCAGGAGGACGGGC
CGGCAGGATGGAGAGCGAATCTGAAGCCCGTGGACAGGAGAAGCCCAGCTGAGAGGACTCTGAAGCCCAA
GGAACCACGGGCCCTGGCAGAGCCGAGGGCGGGGGAGGCCCCCAGGAAGGTCTCAGGCAGCTTTGCTGGG
AGTGTCCACATCACCCTGACCCCCGTGAGGCCTGACAGGACCCCACGCCCAGCCAGCCCAGGACCCAGCC
TCCCAGCCAGGTCCCCCTCCCCACCCCGCCGCAGGAGACTGGCCGTCCCTGCCAGCCTCGACGTTTGTGA
CAACTGGCTTCGGCCGGAGCCCCCTGGCCAGGAAGCCCGAGTGCAGAGCTGGAAGGAGGAGGAGAAGAAA
CCTCACCTTCAGGGCAAACCAGGGAGACCCTTGTCCCCGGCCAATGTCCCTGCTCTGCCTGGCGAGACGG
TGACCTCCCCAGTCAGGCTGCACCCCGACTACCTCTCCCCGGAGGAGATACAGAGGCAGCTGCAGGACAT
CGAGAGGCGGCTGGACGCCCTGGAGCTCCGCGGCGTGGAGCTGGAGAAGCGACTGCGGGCGGCCGAGGGA
GATGACGCTGAGGATAGCCTCATGGTGGACTGGTTCTGGCTCATTCACGAGAAGCAGCTTCTGCTGAGAC
AGGAGTCAGAGCTGATGTACAAGTCCAAGGCCCAGCGTCTGGAGGAGCAGCAGCTGGACATCGAGGGCGA
GCTGCGCCGGCTCATGGCCAAGCCCGAGGCTCTGAAGTCACTGCAGGAGCGGCGGCGGGAGCAGGAGCTG
CTGGAGCAGTACGTGAGCACCGTGAACGACCGCAGTGACATCGTGGACTCGCTGGACGAGGACCGGCTCC
GGGAACAAGAGGAGGATCAGATGCTGCGGGACATGATTGAGAAGCTGGGCCTCCAGAGGAAGAAGTCCAA
GTTCCGCTTGTCCAAGATCTGGTCACCAAAAAGCAAAAGCAGCCCCTCCCAGTAG

Translation (904 aa):
MAAIRALQQWCRQQCEGYRDVNICNMTTSFRDGLAFCAILHRHRPDLINFSALKKENIYENNKLAFRVAE
EHLGIPALLDAEDMVALKVPDRLSILTYVSQYYNYFHGRSPIGGMAGVKRASEDSEEEPSGKKAPVQAAK
LPSPAPARKPPLSPAQTNPVVQRRNEGAGGPPPKTDQALAGSLVSSTCGVCGKHVHLVQRHLADGRLYHR
SCFRCKQCSCTLHSGAYKATGEPGTFVCTSHLPAAASASPKLTGLVPRQPGAMGVDSRTSCSPQKAQEAN
KARPSAWEPAAGNSPARASVPAAPNPAATSATSVHVRSPARPSESRLAPTPTEGKVRPRVTNSSPMGWSS
AAPCTAAAASHPAVPPSAPDPRPATPQGGGAPRVAAPQTTLSSSSTSAATVDPPAWTPSASRTQQARNKF
FQTSAVPPGTSLSGRGPTPSLVLSKDSSKEQARNFLKQALSALEEAGAPAPGRPSPATAAVPSSQPKTEA
PQASPLAKPLQSSSPRVLGLPSRMEPPAPLSTSSTSQASALPPAGRRNLAESSGVGRVGAGSRPKPEAPM
AKGKSTTLTQDMSTSLQEGQEDGPAGWRANLKPVDRRSPAERTLKPKEPRALAEPRAGEAPRKVSGSFAG
SVHITLTPVRPDRTPRPASPGPSLPARSPSPPRRRRLAVPASLDVCDNWLRPEPPGQEARVQSWKEEEKK
PHLQGKPGRPLSPANVPALPGETVTSPVRLHPDYLSPEEIQRQLQDIERRLDALELRGVELEKRLRAAEG
DDAEDSLMVDWFWLIHEKQLLLRQESELMYKSKAQRLEEQQLDIEGELRRLMAKPEALKSLQERRREQEL
LEQYVSTVNDRSDIVDSLDEDRLREQEEDQMLRDMIEKLGLQRKKSKFRLSKIWSPKSKSSPSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH