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Report for CCDS5329.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5329.1 Public Homo sapiens 7 NUDT1 24 110 108 CCDS HistoryNCBI Gene:4521Re-query CCDS DB by CCDS ID:5329.1Re-query CCDS DB by GeneID:4521See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5329.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343985.8 ENSP00000339503.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000343985.8Link to Ensembl Protein Viewer:ENSP00000339503.4Re-query CCDS DB by Nucleotide ID:ENST00000343985Re-query CCDS DB by Protein ID:ENSP00000339503
Original member Current member EBI ENST00000397048.5 ENSP00000380241.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397048.5Link to Ensembl Protein Viewer:ENSP00000380241.1Re-query CCDS DB by Nucleotide ID:ENST00000397048Re-query CCDS DB by Protein ID:ENSP00000380241
Original member Current member NCBI NM_198949.2 NP_945187.1 Accepted alive Link to Nucleotide Sequence:NM_198949.2Link to Protein Sequence:NP_945187.1Re-query CCDS DB by Nucleotide ID:NM_198949Re-query CCDS DB by Protein ID:NP_945187Link to BLAST:NP_945187.1
Original member Current member NCBI NM_198952.2 NP_945190.1 Accepted alive Link to Nucleotide Sequence:NM_198952.2Link to Protein Sequence:NP_945190.1Re-query CCDS DB by Nucleotide ID:NM_198952Re-query CCDS DB by Protein ID:NP_945190Link to BLAST:NP_945190.1
Original member Current member NCBI NM_198954.1 NP_945192.1 Accepted alive Link to Nucleotide Sequence:NM_198954.1Link to Protein Sequence:NP_945192.1Re-query CCDS DB by Nucleotide ID:NM_198954Re-query CCDS DB by Protein ID:NP_945192Link to BLAST:NP_945192.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_945187.1 179 P36639-2 179 100% 0 0
NP_945190.1 179 P36639-2 179 100% 0 0
NP_945192.1 179 P36639-2 179 100% 0 0

Chromosomal Locations for CCDS 5329.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 2242992 2243048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2244563 2244726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2249857 2250002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2250829 2251001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (540 nt):
ATGAGTGGAATTAGCCCTCAGCAGATGGGGGAGCCAGAAGGCAGTTGGAGTGGGAAGAACCCAGGGACCA
TGGGCGCCTCCAGGCTCTATACCCTGGTGCTGGTCCTGCAGCCTCAGCGAGTTCTCCTGGGCATGAAAAA
GCGAGGCTTCGGGGCCGGCCGGTGGAATGGCTTTGGGGGCAAAGTGCAAGAAGGAGAGACCATCGAGGAT
GGGGCTAGGAGGGAGCTGCAGGAGGAGAGCGGTCTGACAGTGGACGCCCTGCACAAGGTGGGCCAGATCG
TGTTTGAGTTCGTGGGCGAGCCTGAGCTCATGGACGTGCATGTCTTCTGCACAGACAGCATCCAGGGGAC
CCCCGTGGAGAGCGACGAAATGCGCCCATGCTGGTTCCAGCTGGATCAGATCCCCTTCAAGGACATGTGG
CCCGACGACAGCTACTGGTTTCCACTCCTGCTTCAGAAGAAGAAATTCCACGGGTACTTCAAGTTCCAGG
GTCAGGACACCATCCTGGACTACACACTCCGCGAGGTGGACACGGTCTAG

Translation (179 aa):
MSGISPQQMGEPEGSWSGKNPGTMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIED
GARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMW
PDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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