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Report for CCDS5352.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5352.1 Public Homo sapiens 7 ZDHHC4 24 110 108 CCDS HistoryNCBI Gene:55146Re-query CCDS DB by CCDS ID:5352.1Re-query CCDS DB by GeneID:55146See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5352.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335965.11 ENSP00000337475.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335965.11Link to Ensembl Protein Viewer:ENSP00000337475.6Re-query CCDS DB by Nucleotide ID:ENST00000335965Re-query CCDS DB by Protein ID:ENSP00000337475
Original member Current member EBI ENST00000396706.2 ENSP00000379934.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396706.2Link to Ensembl Protein Viewer:ENSP00000379934.2Re-query CCDS DB by Nucleotide ID:ENST00000396706Re-query CCDS DB by Protein ID:ENSP00000379934
Original member Current member EBI ENST00000396707.6 ENSP00000379935.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396707.6Link to Ensembl Protein Viewer:ENSP00000379935.2Re-query CCDS DB by Nucleotide ID:ENST00000396707Re-query CCDS DB by Protein ID:ENSP00000379935
Original member Current member EBI ENST00000396709.5 ENSP00000379937.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396709.5Link to Ensembl Protein Viewer:ENSP00000379937.1Re-query CCDS DB by Nucleotide ID:ENST00000396709Re-query CCDS DB by Protein ID:ENSP00000379937
Original member Current member EBI ENST00000396713.6 ENSP00000379941.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396713.6Link to Ensembl Protein Viewer:ENSP00000379941.2Re-query CCDS DB by Nucleotide ID:ENST00000396713Re-query CCDS DB by Protein ID:ENSP00000379941
Original member Current member EBI ENST00000405731.7 ENSP00000385027.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405731.7Link to Ensembl Protein Viewer:ENSP00000385027.3Re-query CCDS DB by Nucleotide ID:ENST00000405731Re-query CCDS DB by Protein ID:ENSP00000385027
Original member Current member NCBI NM_001134387.2 NP_001127859.1 Accepted alive Link to Nucleotide Sequence:NM_001134387.2Link to Protein Sequence:NP_001127859.1Re-query CCDS DB by Nucleotide ID:NM_001134387Re-query CCDS DB by Protein ID:NP_001127859Link to BLAST:NP_001127859.1
Original member Current member NCBI NM_001134388.2 NP_001127860.1 Accepted alive Link to Nucleotide Sequence:NM_001134388.2Link to Protein Sequence:NP_001127860.1Re-query CCDS DB by Nucleotide ID:NM_001134388Re-query CCDS DB by Protein ID:NP_001127860Link to BLAST:NP_001127860.1
Original member Current member NCBI NM_001134389.2 NP_001127861.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001134389.2Link to Protein Sequence:NP_001127861.1Re-query CCDS DB by Nucleotide ID:NM_001134389Re-query CCDS DB by Protein ID:NP_001127861Link to BLAST:NP_001127861.1
Original member Current member NCBI NM_001371293.1 NP_001358222.1 Accepted alive Link to Nucleotide Sequence:NM_001371293.1Link to Protein Sequence:NP_001358222.1Re-query CCDS DB by Nucleotide ID:NM_001371293Re-query CCDS DB by Protein ID:NP_001358222Link to BLAST:NP_001358222.1
Original member Current member NCBI NM_001371294.1 NP_001358223.1 Accepted alive Link to Nucleotide Sequence:NM_001371294.1Link to Protein Sequence:NP_001358223.1Re-query CCDS DB by Nucleotide ID:NM_001371294Re-query CCDS DB by Protein ID:NP_001358223Link to BLAST:NP_001358223.1
Original member Current member NCBI NM_001371295.1 NP_001358224.1 Accepted alive Link to Nucleotide Sequence:NM_001371295.1Link to Protein Sequence:NP_001358224.1Re-query CCDS DB by Nucleotide ID:NM_001371295Re-query CCDS DB by Protein ID:NP_001358224Link to BLAST:NP_001358224.1
Original member Current member NCBI NM_001371296.1 NP_001358225.1 Accepted alive Link to Nucleotide Sequence:NM_001371296.1Link to Protein Sequence:NP_001358225.1Re-query CCDS DB by Nucleotide ID:NM_001371296Re-query CCDS DB by Protein ID:NP_001358225Link to BLAST:NP_001358225.1
Original member Current member NCBI NM_001371297.1 NP_001358226.1 Accepted alive Link to Nucleotide Sequence:NM_001371297.1Link to Protein Sequence:NP_001358226.1Re-query CCDS DB by Nucleotide ID:NM_001371297Re-query CCDS DB by Protein ID:NP_001358226Link to BLAST:NP_001358226.1
Original member Current member NCBI NM_018106.4 NP_060576.1 Accepted alive Link to Nucleotide Sequence:NM_018106.4Link to Protein Sequence:NP_060576.1Re-query CCDS DB by Nucleotide ID:NM_018106Re-query CCDS DB by Protein ID:NP_060576Link to BLAST:NP_060576.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001127859.1 344 Q9NPG8 344 100% 0 0
NP_001127860.1 344 Q9NPG8 344 100% 0 0
NP_001127861.1 344 Q9NPG8 344 100% 0 0
NP_001358222.1 344 Q9NPG8 344 100% 0 0
NP_001358223.1 344 Q9NPG8 344 100% 0 0
NP_001358224.1 344 Q9NPG8 344 100% 0 0
NP_001358225.1 344 Q9NPG8 344 100% 0 0
NP_001358226.1 344 Q9NPG8 344 100% 0 0
NP_060576.1 344 Q9NPG8 344 100% 0 0

Chromosomal Locations for CCDS 5352.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 6580562 6580678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6581607 6581680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6582073 6582251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6583306 6583431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6585016 6585260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6588617 6588910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1035 nt):
ATGGACTTTCTGGTCCTCTTCTTGTTCTACCTGGCTTCGGTGCTGATGGGTCTTGTTCTTATCTGCGTCT
GCTCGAAAACCCATAGCTTGAAAGGCCTGGCCAGGGGAGGAGCACAGATATTTTCCTGTATAATTCCAGA
ATGTCTTCAGAGAGCCGTGCATGGATTGCTTCATTACCTTTTCCATACGAGAAACCACACCTTCATTGTC
CTGCACCTGGTCTTGCAAGGGATGGTTTATACTGAGTACACCTGGGAAGTATTTGGCTACTGTCAGGAGC
TGGAGTTGTCCTTGCATTACCTTCTTCTGCCCTATCTGCTGCTAGGTGTAAACCTGTTTTTTTTCACCCT
GACTTGTGGAACCAATCCTGGCATTATAACAAAAGCAAATGAATTATTATTTCTTCATGTTTATGAATTT
GATGAAGTGATGTTTCCAAAGAACGTGAGGTGCTCTACTTGTGATTTAAGGAAACCAGCTCGATCCAAGC
ACTGCAGTGTGTGTAACTGGTGTGTGCACCGTTTCGACCATCACTGTGTTTGGGTGAACAACTGCATCGG
GGCCTGGAACATCAGGTACTTCCTCATCTACGTCTTGACCTTGACGGCCTCGGCTGCCACCGTCGCCATT
GTGAGCACCACTTTTCTGGTCCACTTGGTGGTGATGTCAGATTTATACCAGGAGACTTACATCGATGACC
TTGGACACCTCCATGTTATGGACACGGTCTTTCTTATTCAGTACCTGTTCCTGACTTTTCCACGGATTGT
CTTCATGCTGGGCTTTGTCGTGGTTCTGAGCTTCCTCCTGGGTGGCTACCTGTTGTTTGTCCTGTATCTG
GCGGCCACCAACCAGACTACTAACGAGTGGTACAGAGGTGACTGGGCCTGGTGCCAGCGTTGTCCCCTTG
TGGCCTGGCCTCCGTCAGCAGAGCCCCAAGTCCACCGGAACATTCACTCCCATGGGCTTCGGAGCAACCT
TCAAGAGATCTTTCTACCTGCCTTTCCATGTCATGAGAGGAAGAAACAAGAATGA

Translation (344 aa):
MDFLVLFLFYLASVLMGLVLICVCSKTHSLKGLARGGAQIFSCIIPECLQRAVHGLLHYLFHTRNHTFIV
LHLVLQGMVYTEYTWEVFGYCQELELSLHYLLLPYLLLGVNLFFFTLTCGTNPGIITKANELLFLHVYEF
DEVMFPKNVRCSTCDLRKPARSKHCSVCNWCVHRFDHHCVWVNNCIGAWNIRYFLIYVLTLTASAATVAI
VSTTFLVHLVVMSDLYQETYIDDLGHLHVMDTVFLIQYLFLTFPRIVFMLGFVVVLSFLLGGYLLFVLYL
AATNQTTNEWYRGDWAWCQRCPLVAWPPSAEPQVHRNIHSHGLRSNLQEIFLPAFPCHERKKQE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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