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Report for CCDS53601.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53601.1 Public Homo sapiens 11 AMPD3 24 110 108 CCDS HistoryNCBI Gene:272Re-query CCDS DB by CCDS ID:53601.1Re-query CCDS DB by GeneID:272See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 53601.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000444303.6 ENSP00000396000.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000444303.6Link to Ensembl Protein Viewer:ENSP00000396000.2Re-query CCDS DB by Nucleotide ID:ENST00000444303Re-query CCDS DB by Protein ID:ENSP00000396000
Original member Current member NCBI NM_001172431.2 NP_001165902.1 Accepted alive Link to Nucleotide Sequence:NM_001172431.2Link to Protein Sequence:NP_001165902.1Re-query CCDS DB by Nucleotide ID:NM_001172431Re-query CCDS DB by Protein ID:NP_001165902Link to BLAST:NP_001165902.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001165902.1 608 Q01432-6 608 100% 0 0

Chromosomal Locations for CCDS 53601.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 10482114 10482225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 10484820 10485039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 10487235 10487364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 10493349 10493543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 10494899 10495030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 10495570 10495733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 10496812 10496938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 10500086 10500249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 10501470 10501590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 10502721 10502894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 10504549 10504659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 10505708 10505884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1827 nt):
ATGATCCGGGAGAAGTATGCGCGGCTCGCCTACCACCGCTTCCCGCGGATCACATCCCAGTACCTGGGTC
ATCCGCGGGCGGATACTGCACCTCCGGAAGAGGGCCTTCCAGACTTCCACCCTCCTCCACTGCCCCAGGA
AGACCCCTACTGCCTGGATGATGCACCCCCCAACCTGGATTACTTGGTCCACATGCAGGGGGGCATCCTC
TTTGTGTATGATAACAAGAAGATGCTGGAGCACCAGGAGCCGCACAGCCTACCCTACCCCGACCTGGAGA
CCTACACGGTGGACATGAGCCACATCCTGGCTCTCATCACCGATGGCCCCACGAAAACCTATTGTCACCG
GCGACTGAACTTTCTGGAATCCAAGTTCAGCCTTCATGAGATGTTAAACGAAATGTCCGAGTTCAAAGAG
TTGAAGAGTAACCCCCACCGGGACTTCTATAACGTGAGAAAGGTGGACACACACATCCATGCGGCCGCCT
GCATGAACCAAAAGCATCTGCTGCGCTTCATCAAGCACACATACCAGACGGAGCCTGACAGGACTGTGGC
AGAGAAGCGGGGCCGGAAGATCACCCTGCGGCAGGTGTTTGACGGCCTGCACATGGACCCCTACGACCTC
ACTGTGGACTCACTGGATGTCCACGCGGGCCGGCAGACATTCCACCGCTTTGACAAGTTCAACTCCAAAT
ACAACCCTGTGGGGGCCAGTGAGCTGCGTGACCTGTATTTGAAAACTGAAAACTATCTGGGAGGAGAGTA
CTTTGCTCGGATGGTCAAGGAGGTTGCCCGGGAGCTGGAGGAGAGCAAGTACCAGTACTCAGAGCCACGG
CTCTCCATCTACGGCCGCAGTCCTGAGGAGTGGCCCAACCTGGCCTACTGGTTCATCCAGCACAAGGTCT
ACTCTCCCAACATGCGCTGGATCATCCAGGTGCCCCGGATTTATGACATATTTAGGTCAAAGAAGCTGCT
GCCAAACTTTGGGAAGATGCTGGAGAACATCTTCCTGCCCCTTTTCAAGGCCACTATCAACCCCCAAGAT
CATCGAGAGCTTCACCTCTTCCTTAAATATGTGACGGGGTTTGACAGCGTGGATGATGAGTCCAAGCACA
GCGACCACATGTTTTCCGACAAGAGCCCAAACCCGGACGTCTGGACCAGTGAGCAGAACCCACCCTACAG
CTACTACCTGTACTACATGTATGCCAACATCATGGTGCTCAACAACCTCCGCAGGGAGCGCGGCCTGAGC
ACGTTCCTGTTCCGGCCGCACTGTGGGGAAGCCGGCTCCATCACCCACCTGGTGTCTGCCTTCCTCACTG
CTGACAACATTTCCCACGGGCTGCTCCTCAAGAAGAGTCCGGTATTGCAGTATCTCTACTACCTTGCTCA
GATCCCCATTGCCATGTCTCCTCTTAGCAACAACAGTTTGTTCCTCGAATATTCCAAGAACCCTCTGAGG
GAATTCCTACACAAGGGACTGCATGTTTCTCTTTCCACCGATGACCCCATGCAGTTCCACTACACGAAGG
AAGCACTTATGGAAGAATATGCCATTGCAGCTCAAGTGTGGAAGCTGAGCACCTGCGACCTGTGTGAGAT
CGCCAGGAACAGCGTGCTGCAGAGCGGCCTCTCGCATCAGGAAAAGCAAAAGTTTCTGGGACAAAATTAT
TATAAAGAAGGACCTGAAGGAAATGATATTCGAAAGACAAATGTGGCTCAGATCCGGATGGCATTCCGAT
ATGAGACCTTATGCAATGAGCTCAGCTTCCTGTCTGATGCTATGAAATCAGAAGAGATCACCGCCTTGAC
CAACTAG

Translation (608 aa):
MIREKYARLAYHRFPRITSQYLGHPRADTAPPEEGLPDFHPPPLPQEDPYCLDDAPPNLDYLVHMQGGIL
FVYDNKKMLEHQEPHSLPYPDLETYTVDMSHILALITDGPTKTYCHRRLNFLESKFSLHEMLNEMSEFKE
LKSNPHRDFYNVRKVDTHIHAAACMNQKHLLRFIKHTYQTEPDRTVAEKRGRKITLRQVFDGLHMDPYDL
TVDSLDVHAGRQTFHRFDKFNSKYNPVGASELRDLYLKTENYLGGEYFARMVKEVARELEESKYQYSEPR
LSIYGRSPEEWPNLAYWFIQHKVYSPNMRWIIQVPRIYDIFRSKKLLPNFGKMLENIFLPLFKATINPQD
HRELHLFLKYVTGFDSVDDESKHSDHMFSDKSPNPDVWTSEQNPPYSYYLYYMYANIMVLNNLRRERGLS
TFLFRPHCGEAGSITHLVSAFLTADNISHGLLLKKSPVLQYLYYLAQIPIAMSPLSNNSLFLEYSKNPLR
EFLHKGLHVSLSTDDPMQFHYTKEALMEEYAIAAQVWKLSTCDLCEIARNSVLQSGLSHQEKQKFLGQNY
YKEGPEGNDIRKTNVAQIRMAFRYETLCNELSFLSDAMKSEEITALTN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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