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Report for CCDS53639.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53639.1 Public Homo sapiens 11 CYB561A3 24 110 108 CCDS HistoryNCBI Gene:220002Re-query CCDS DB by CCDS ID:53639.1Re-query CCDS DB by GeneID:220002See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 53639.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000426130.6 ENSP00000398979.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000426130.6Link to Ensembl Protein Viewer:ENSP00000398979.2Re-query CCDS DB by Nucleotide ID:ENST00000426130Re-query CCDS DB by Protein ID:ENSP00000398979
Original member Current member NCBI NM_001161454.1 NP_001154926.1 Accepted alive Link to Nucleotide Sequence:NM_001161454.1Link to Protein Sequence:NP_001154926.1Re-query CCDS DB by Nucleotide ID:NM_001161454Re-query CCDS DB by Protein ID:NP_001154926Link to BLAST:NP_001154926.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001154926.1 259 Q8NBI2-2 259 100% 0 0

Chromosomal Locations for CCDS 53639.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 61350399 61350422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 61350991 61351147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 61352985 61353139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 61353784 61353992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 61356530 61356728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 61357203 61357238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (780 nt):
ATGGGGAAGAACTTTTCTGACTCCTTCCTGTCTAGGGAGTGCGTGATCAGAATGGTGTCTGGACGGTTCT
ACTTGTCCTGCCTGCTGCTGGGGTCCCTGGGCTCTATGTGCATCCTCTTCACTATCTACTGGATGCAGTA
CTGGCGTGGTGGCTTTGCCTGGAATGGCAGCATCTACATGTTCAACTGGCACCCAGTGCTTATGGTTGCT
GGCATGGTGGTATTCTATGGAGGTGCGTCACTGGTGTACCGCCTGCCCCAGTCGTGGGTGGGGCCCAAAC
TGCCCTGGAAACTCCTCCATGCAGCGCTGCACCTGATGGCCTTCGTCCTCACTGTTGTGGGGCTGGTTGC
TGTCTTTACGTTTCACAACCATGGAAGGACTGCCAACCTCTACTCCCTTCACAGCTGGCTGGGCATCACC
ACTGTCTTCCTCTTCGCCTGCCAGTGGTTCCTGGGCTTTGCTGTCTTCCTCCTGCCCTGGGCGTCCATGT
GGCTGCGCAGCCTCCTAAAACCTATCCACGTCTTTTTTGGAGCCGCCATCCTCTCTCTGTCCATCGCATC
CGTCATTTCGGGCATTAATGAGAAGCTTTTCTTCAGTTTGAAAAACACCACCAGGCCATACCACAGCCTG
CCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTGGTGCTCTACA
TCCTTCTGGCTTCATCTTGGAAGCGCCCAGAGCCGGGGATCCTGACCGACAGACAGCCCCTGCTGCATGA
TGGGGAGTGA

Translation (259 aa):
MGKNFSDSFLSRECVIRMVSGRFYLSCLLLGSLGSMCILFTIYWMQYWRGGFAWNGSIYMFNWHPVLMVA
GMVVFYGGASLVYRLPQSWVGPKLPWKLLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWLGIT
TVFLFACQWFLGFAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKLFFSLKNTTRPYHSL
PSEAVFANSTGMLVVAFGLLVLYILLASSWKRPEPGILTDRQPLLHDGE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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