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Report for CCDS53851.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53851.1 Public Homo sapiens 12 ZNF268 24 110 108 CCDS HistoryNCBI Gene:10795Re-query CCDS DB by CCDS ID:53851.1Re-query CCDS DB by GeneID:10795See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53851.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000541211.6 ENSP00000442446.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541211.6Link to Ensembl Protein Viewer:ENSP00000442446.2Re-query CCDS DB by Nucleotide ID:ENST00000541211Re-query CCDS DB by Protein ID:ENSP00000442446
Original member Current member NCBI NM_001165885.2 NP_001159357.1 Accepted alive Link to Nucleotide Sequence:NM_001165885.2Link to Protein Sequence:NP_001159357.1Re-query CCDS DB by Nucleotide ID:NM_001165885Re-query CCDS DB by Protein ID:NP_001159357Link to BLAST:NP_001159357.1

Chromosomal Locations for CCDS 53851.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 133181998 133182030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133187872 133188072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133191908 133192003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133202144 133202317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (504 nt):
ATGGCCACCAGGGTCCGGACAGCTTCTATTTGGGTCCCACCTCTCCAAGAACGAAACAGTTCATGGGATA
GGATCAGAAAGCTCCAAGGTCAGGAATCCATCTTGGGCCAAGGGACTCCTGGTCTGCAACCTCTCCCTGG
AACACCCAGGCAGAAGCAGAAGAGTCGCAGAATAGAGAAAGTCCTAGAGTGGCTGTTTATTTCCCAAGAG
CAGCCAAAAATCACCAAGTCCTGGGGTACCAACACACCAAACCTGATATCATCTTCAAGTTGGAACAAGG
AGAAGAGCTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCAAACACAGTCTGGAAAATTGAT
GATCTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTA
CATTTGGAAAACTATGTCTTCTTAGTACAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCA
TGGAAAGAGTTTGA

Translation (167 aa):
MATRVRTASIWVPPLQERNSSWDRIRKLQGQESILGQGTPGLQPLPGTPRQKQKSRRIEKVLEWLFISQE
QPKITKSWGTNTPNLISSSSWNKEKSCVWCRPKFQIRPVQTQSGKLMILWIGIRKIKTSWEVRQKALNAL
HLENYVFLVQSIFQDKNLINVARMERV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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