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Report for CCDS53977.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53977.1 Public Homo sapiens 15 PGPEP1L 24 110 108 CCDS HistoryNCBI Gene:145814Re-query CCDS DB by CCDS ID:53977.1Re-query CCDS DB by GeneID:145814See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53977.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378919.6 ENSP00000368199.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378919.6Link to Ensembl Protein Viewer:ENSP00000368199.6Re-query CCDS DB by Nucleotide ID:ENST00000378919Re-query CCDS DB by Protein ID:ENSP00000368199
Original member Current member NCBI NM_001102612.2 NP_001096082.2 Accepted alive Link to Nucleotide Sequence:NM_001102612.2Link to Protein Sequence:NP_001096082.2Re-query CCDS DB by Nucleotide ID:NM_001102612Re-query CCDS DB by Protein ID:NP_001096082Link to BLAST:NP_001096082.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001096082.2 196 A6NFU8-1 196 100% 0 0

Chromosomal Locations for CCDS 53977.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 98968478 98968697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 98969425 98969651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 98971036 98971158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99001187 99001207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (591 nt):
ATGAAGCCGCGGACTCTCGTGGAGCTCTCCAAGCTGGGCCTGGGGAATGAAACAGTGGTGCAGCTGCGGA
CTCTGGAGCTGCCTGTAGATTACAGGGAGGCTAAGCGGAGGGTCACCGGAATCTGGGAAGATCATCAGCC
GCAACTCGTCGTGCATGTGGGCATGGACACCGCCGCCAAGGCGATCATTCTGGAACAGTCTGGCAAGAAC
CAAGGCTACCGGGACGCCGACATCCGCAGCTTCTGGCCCGAGGGCGGCGTGTGCCTACCTGGCAGCCCAG
ACGTGCTGGAGTCAGGGGTCTGCATGAAGGCAGTCTGCAAGCGCGTAGCTGTGGAGGGTGTCGACGTGAT
CTTTTCCCGAGATGCAGGCAGATACGTCTGTGATTATACCTATTACCTGTCTCTGCATCATGGAAAGGGC
TGCGCGGCACTCATCCATGTCCCTCCACTATCGCGCGGGCTCCCGGCCAGCCTGCTGGGAAGAGCCTTGA
GAGTCATCATCCAGGAAATGCTGGAAGAGGTGGGAAAGCCCAAGCACAGAGCCCAGTTCGAAGAAAACTC
AACCATGGTCCTTCCAGCCAAAGGGAACTGA

Translation (196 aa):
MKPRTLVELSKLGLGNETVVQLRTLELPVDYREAKRRVTGIWEDHQPQLVVHVGMDTAAKAIILEQSGKN
QGYRDADIRSFWPEGGVCLPGSPDVLESGVCMKAVCKRVAVEGVDVIFSRDAGRYVCDYTYYLSLHHGKG
CAALIHVPPLSRGLPASLLGRALRVIIQEMLEEVGKPKHRAQFEENSTMVLPAKGN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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