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Report for CCDS54001.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54001.1 Public Homo sapiens 16 ZNF764 24 110 108 CCDS HistoryNCBI Gene:92595Re-query CCDS DB by CCDS ID:54001.1Re-query CCDS DB by GeneID:92595See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54001.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395091.3 ENSP00000378526.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395091.3Link to Ensembl Protein Viewer:ENSP00000378526.2Re-query CCDS DB by Nucleotide ID:ENST00000395091Re-query CCDS DB by Protein ID:ENSP00000378526
Original member Current member NCBI NM_001172679.2 NP_001166150.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001172679.2Link to Protein Sequence:NP_001166150.1Re-query CCDS DB by Nucleotide ID:NM_001172679Re-query CCDS DB by Protein ID:NP_001166150Link to BLAST:NP_001166150.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001166150.1 407 Q96H86-2 407 100% 0 0

Chromosomal Locations for CCDS 54001.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 30555194 30556107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30557733 30557846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30557987 30558182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1224 nt):
ATGGCGCCGCCTCTGGCCCCGCTCCCTCCCCGGGACCCAAACGGGGCCGGACCCGAGTGGAGGGAGCCGG
GGGCTGTGAGCTTCGCGGACGTGGCCGTGTACTTCTGCCGGGAGGAGTGGGGCTGCTTGCGGCCAGCGCA
GAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTACGGCCACCTGAGCGCTCTCGGAATCGGAGGCAAC
AAGCCAGCTCTCATCTCCTGGGTGGAGGAGGAGGCCGAACTGTGGGGTCCGGCTGCCCAGGATCCGGAGG
TGGCGAAATGTCAGACACAAACGGACCCAGATTCCAGAAACAAGAAAAAGGAAAGACAAAGGGAAGGGAC
GGGAGCCCTGGAGAAGCCCGACCCTGTGGCCGCCGGGTCTCCTGGGCTGAAGTCTCCCCAAGCCCCCTCG
GCCGGGCCCCCTTATGGTTGGGAGCAGCTGTCCAAGGCACCGCACCGGGGACGCCCCTCCCTCTGTGCCC
ACCCCCCTGTCCCCCGAGCTGACCAGCGTCATGGCTGCTACGTGTGCGGGAAGAGCTTTGCCTGGCGCTC
CACACTGGTGGAGCACGTCTACAGTCACACTGGCGAGAAGCCCTTCCACTGCACTGACTGCGGCAAGGGC
TTCGGCCACGCTTCCTCCCTGAGCAAACACCGGGCCATCCATCGTGGGGAGCGGCCCCACCGCTGTCTGG
AGTGTGGCCGGGCCTTCACGCAGCGCTCGGCGCTGACTTCGCACCTGCGCGTCCACACCGGCGAGAAACC
CTATGGCTGCGCCGACTGTGGCCGCCGCTTCAGCCAGAGCTCTGCCCTCTACCAGCACCGGCGCGTGCAC
AGCGGCGAGACCCCCTTCCCCTGCCCGGACTGTGGCCGCGCCTTCGCCTACCCCTCGGACCTGCGGCGCC
ACGTGCGCACCCACACCGGCGAGAAGCCCTACCCGTGCCCGGACTGCGGGCGCTGCTTCCGCCAGAGCTC
GGAGATGGCAGCCCACAGGCGCACCCACAGCGGCGAGAAGCCCTACCCCTGCCCGCAGTGCGGCCGCCGC
TTTGGCCAGAAGTCAGCCGTGGCCAAACACCAGTGGGTTCATCGGCCCGGGGCCGGGGGCCACAGGGGCC
GGGTCGCCGGGCGTCTGTCTGTGACCCTGACCCCTGGCCACGGAGACCTGGACCCGCCCGTGGGCTTCCA
GCTGTACCCGGAGATATTCCAGGAGTGTGGGTGA

Translation (407 aa):
MAPPLAPLPPRDPNGAGPEWREPGAVSFADVAVYFCREEWGCLRPAQRALYRDVMRETYGHLSALGIGGN
KPALISWVEEEAELWGPAAQDPEVAKCQTQTDPDSRNKKKERQREGTGALEKPDPVAAGSPGLKSPQAPS
AGPPYGWEQLSKAPHRGRPSLCAHPPVPRADQRHGCYVCGKSFAWRSTLVEHVYSHTGEKPFHCTDCGKG
FGHASSLSKHRAIHRGERPHRCLECGRAFTQRSALTSHLRVHTGEKPYGCADCGRRFSQSSALYQHRRVH
SGETPFPCPDCGRAFAYPSDLRRHVRTHTGEKPYPCPDCGRCFRQSSEMAAHRRTHSGEKPYPCPQCGRR
FGQKSAVAKHQWVHRPGAGGHRGRVAGRLSVTLTPGHGDLDPPVGFQLYPEIFQECG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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