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Report for CCDS54172.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54172.1 Public Homo sapiens 17 ENDOV 24 110 108 CCDS HistoryNCBI Gene:284131Re-query CCDS DB by CCDS ID:54172.1Re-query CCDS DB by GeneID:284131See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54172.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000518137.6 ENSP00000429190.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000518137.6Link to Ensembl Protein Viewer:ENSP00000429190.1Re-query CCDS DB by Nucleotide ID:ENST00000518137Re-query CCDS DB by Protein ID:ENSP00000429190
Original member Current member NCBI NM_173627.5 NP_775898.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173627.5Link to Protein Sequence:NP_775898.2Re-query CCDS DB by Nucleotide ID:NM_173627Re-query CCDS DB by Protein ID:NP_775898Link to BLAST:NP_775898.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775898.2 282 Q8N8Q3-1 282 100% 0 0

Chromosomal Locations for CCDS 54172.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 80415195 80415250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80415650 80415821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80421828 80421962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80422206 80422245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80423520 80423632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80425032 80425100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80425492 80425620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80428596 80428660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80429773 80429831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80436133 80436143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (849 nt):
ATGGCCCTGGAGGCGGCGGGAGGGCCGCCGGAGGAAACGCTGTCACTGTGGAAACGGGAGCAAGCTCGGC
TGAAGGCCCACGTCGTAGACCGGGACACCGAGGCGTGGCAGCGAGACCCCGCCTTCTCGGGTCTGCAGAG
GGTCGGGGGCGTTGACGTGTCCTTCGTGAAAGGGGACAGTGTCCGCGCTTGTGCTTCCCTGGTGGTGCTC
AGCTTCCCTGAGCTCGAGGTGGTGTATGAGGAGAGCCGCATGGTCAGCCTCACAGCCCCCTACGTGTCGG
GCTTCCTGGCCTTCCGAGAGGTGCCCTTCTTGCTGGAGCTGGTGCAGCAGCTGCGGGAGAAGGAGCCGGG
CCTCATGCCCCAGGTCCTTCTTGTGGATGGAAACGGGGTACTCCACCACCGAGGCTTTGGGGTGGCCTGC
CACCTTGGCGTCCTTACAGACCTGCCGTGTGTTGGGGTGGCCAAGAAACTTCTGCAGGTGGATGGGCTGG
AGAACAACGCCCTGCACAAGGAGAAGATCCGACTCCTGCAGACTCGAGGAGACTCATTCCCTCTGCTGGG
AGACTCTGGGACTGTCCTGGGAATGGCCCTGAGGAGCCACGACCGCAGCACCAGGCCCCTCTACATCTCC
GTGGGCCACAGGATGAGCCTGGAGGCCGCTGTGCGCCTGACTTGCTGCTGCTGCAGGTTCCGGATCCCAG
AGCCCGTGCGCCAGGCTGACATCTGCTCCCGAGAGCACATCCGCAAGTCGCTGGGACTCCCCGGGCCACC
CACACCGAGGAGCCCGAAGGCGCAGAGGCCAGTGGCATGCCCCAAAGGAGACTCCGGAGAGTCCTCAGCA
CTTTGTTGA

Translation (282 aa):
MALEAAGGPPEETLSLWKREQARLKAHVVDRDTEAWQRDPAFSGLQRVGGVDVSFVKGDSVRACASLVVL
SFPELEVVYEESRMVSLTAPYVSGFLAFREVPFLLELVQQLREKEPGLMPQVLLVDGNGVLHHRGFGVAC
HLGVLTDLPCVGVAKKLLQVDGLENNALHKEKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYIS
VGHRMSLEAAVRLTCCCCRFRIPEPVRQADICSREHIRKSLGLPGPPTPRSPKAQRPVACPKGDSGESSA
LC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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