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Report for CCDS54173.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54173.1 Public Homo sapiens 17 ENDOV 24 110 108 CCDS HistoryNCBI Gene:284131Re-query CCDS DB by CCDS ID:54173.1Re-query CCDS DB by GeneID:284131See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54173.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000520367.5 ENSP00000431036.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000520367.5Link to Ensembl Protein Viewer:ENSP00000431036.1Re-query CCDS DB by Nucleotide ID:ENST00000520367Re-query CCDS DB by Protein ID:ENSP00000431036
Original member Current member NCBI NM_001164637.3 NP_001158109.1 Accepted alive Link to Nucleotide Sequence:NM_001164637.3Link to Protein Sequence:NP_001158109.1Re-query CCDS DB by Nucleotide ID:NM_001164637Re-query CCDS DB by Protein ID:NP_001158109Link to BLAST:NP_001158109.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001158109.1 237 Q8N8Q3-2 237 100% 0 0

Chromosomal Locations for CCDS 54173.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 80415195 80415250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80415650 80415821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80422206 80422245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80423520 80423632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80425032 80425100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80425492 80425620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80428596 80428660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80429773 80429831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80436133 80436143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (714 nt):
ATGGCCCTGGAGGCGGCGGGAGGGCCGCCGGAGGAAACGCTGTCACTGTGGAAACGGGAGCAAGCTCGGC
TGAAGGCCCACGTCGTAGACCGGGACACCGAGGCGTGGCAGCGAGACCCCGCCTTCTCGGGTCTGCAGAG
GGTCGGGGGCGTTGACGTGTCCTTCGTGAAAGGGGACAGTGTCCGCGCTTGTGCTTCCCTGGTGGTGCTC
AGCTTCCCTGAGCTCGAGGTCCTTCTTGTGGATGGAAACGGGGTACTCCACCACCGAGGCTTTGGGGTGG
CCTGCCACCTTGGCGTCCTTACAGACCTGCCGTGTGTTGGGGTGGCCAAGAAACTTCTGCAGGTGGATGG
GCTGGAGAACAACGCCCTGCACAAGGAGAAGATCCGACTCCTGCAGACTCGAGGAGACTCATTCCCTCTG
CTGGGAGACTCTGGGACTGTCCTGGGAATGGCCCTGAGGAGCCACGACCGCAGCACCAGGCCCCTCTACA
TCTCCGTGGGCCACAGGATGAGCCTGGAGGCCGCTGTGCGCCTGACTTGCTGCTGCTGCAGGTTCCGGAT
CCCAGAGCCCGTGCGCCAGGCTGACATCTGCTCCCGAGAGCACATCCGCAAGTCGCTGGGACTCCCCGGG
CCACCCACACCGAGGAGCCCGAAGGCGCAGAGGCCAGTGGCATGCCCCAAAGGAGACTCCGGAGAGTCCT
CAGCACTTTGTTGA

Translation (237 aa):
MALEAAGGPPEETLSLWKREQARLKAHVVDRDTEAWQRDPAFSGLQRVGGVDVSFVKGDSVRACASLVVL
SFPELEVLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHKEKIRLLQTRGDSFPL
LGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRFRIPEPVRQADICSREHIRKSLGLPG
PPTPRSPKAQRPVACPKGDSGESSALC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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