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Report for CCDS54391.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54391.1 Public Homo sapiens 2 DBI 24 110 108 CCDS HistoryNCBI Gene:1622Re-query CCDS DB by CCDS ID:54391.1Re-query CCDS DB by GeneID:1622See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54391.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000627305.2 ENSP00000486361.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000627305.2Link to Ensembl Protein Viewer:ENSP00000486361.1Re-query CCDS DB by Nucleotide ID:ENST00000627305Re-query CCDS DB by Protein ID:ENSP00000486361
Original member Current member NCBI NM_001178017.3 NP_001171488.1 Accepted alive Link to Nucleotide Sequence:NM_001178017.3Link to Protein Sequence:NP_001171488.1Re-query CCDS DB by Nucleotide ID:NM_001178017Re-query CCDS DB by Protein ID:NP_001171488Link to BLAST:NP_001171488.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171488.1 148 P07108-5 148 100% 0 0

Chromosomal Locations for CCDS 54391.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 119367337 119367528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119368188 119368305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119370740 119370802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119372245 119372318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (447 nt):
ATGGAGAGATGGGGGAAGGGGTTGCACGGATTGGAGGAGCGAGGAGACTCAGTCCCCATCCCGAAGCACA
GGGCAGGACGTCGCGGCGGAGTGGGGAAGCGAGGAGTCCGTGGCCGAGAGCTTGGAGGTCAGGGGAAGTA
CGGGGCCGGCTGCTCAGAGTGCGGGACGAGGAGAATCGCGGCCCGGGGAGAGGCTGAGTTTGAGAAAGCT
GCAGAGGAGGTTAGGCACCTTAAGACCAAGCCATCGGATGAGGAGATGCTGTTCATCTATGGCCACTACA
AACAAGCAACTGTGGGCGACATAAATACAGAACGGCCCGGGATGTTGGACTTCACGGGCAAGGCCAAGTG
GGATGCCTGGAATGAGCTGAAAGGGACTTCCAAGGAAGATGCCATGAAAGCTTACATCAACAAAGTAGAA
GAGCTAAAGAAAAAATACGGGATATGA

Translation (148 aa):
MERWGKGLHGLEERGDSVPIPKHRAGRRGGVGKRGVRGRELGGQGKYGAGCSECGTRRIAARGEAEFEKA
AEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVE
ELKKKYGI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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