CCDS Report for Consensus CDS

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Report for CCDS54837.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
54837.1	Public	Homo sapiens	5	RAI14	24	110	108

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54837.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000512629.5	ENSP00000422377.1		Accepted	alive
		NCBI	NM_001145522.2	NP_001138994.1		Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001138994.1	951	Q9P0K7-4	951	100%	0	0

Chromosomal Locations for CCDS 54837.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)

Genome Browser links:

Chromosome	Start	Stop
5	34686920	34686955
5	34757468	34757598
5	34795939	34796027
5	34803712	34803776
5	34807800	34807857
5	34808584	34808654
5	34811012	34811118
5	34811767	34811945
5	34812180	34812208
5	34814583	34814669
5	34818797	34818851
5	34821732	34821850
5	34822956	34824491
5	34826330	34826479
5	34829732	34829797
5	34830688	34830765

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2856 nt):
ATGAAGAGCTTGAAAGCGAAGTTCAGGAAGAGTGACACCAATGAGTGGAACAAGAATGATGACCGGCTAC TGCAGGCCGTGGAGAATGGAGATGCGGAGAAGGTGGCCTCACTGCTCGGCAAGAAGGGGGCCAGTGCCAC CAAACACGACAGTGAGGGCAAGACCGCTTTCCATCTTGCTGCTGCAAAAGGACACGTGGAATGCCTCAGG GTCATGATTACACATGGTGTGGATGTGACAGCCCAAGATACTACCGGACACAGCGCCTTACATCTCGCAG CCAAGAACAGCCACCATGAATGCATCAGGAAGCTGCTTCAGTCTAAATGCCCAGCCGAAAGTGTCGACAG CTCTGGGAAAACAGCTTTACATTATGCAGCGGCTCAGGGCTGCCTTCAAGCTGTGCAGATTCTCTGCGAA CACAAGAGCCCCATAAACCTCAAAGATTTGGATGGGAATATACCGCTGCTTCTTGCTGTACAAAATGGTC ACAGTGAGATCTGTCACTTTCTCCTGGATCATGGAGCAGATGTCAATTCCAGGAACAAAAGTGGAAGAAC TGCTCTCATGCTGGCCTGTGAGATTGGCAGCTCTAACGCTGTGGAAGCCTTAATTAAAAAGGGTGCAGAC CTAAACCTTGTAGATTCTCTTGGATACAATGCCTTACATTATTCCAAACTCTCAGAAAATGCAGGAATTC AAAGCCTTCTATTATCAAAAATCTCTCAGGATGCTGATTTAAAGACCCCAACAAAACCAAAGCAGTTGAG TGATGTCTCTTCCCCAAGATCAATAACTTCGACTCCACTATCGGGAAAGGAATCGGTATTTTTTGCTGAA CCACCCTTCAAGGCTGAGATCAGTTCTATACGAGAAAACAAAGACAGACTAAGTGACAGTACTACAGGTG CTGATAGCTTATTGGATATAAGTTCTGAAGCTGACCAACAAGATCTTCTCTCTCTATTGCAAGCAAAAGT TGCTTCCCTTACCTTACACAATAAGGAGTTACAAGATAAATTACAGGCCAAATCACCCAAGGAGGCGGAA GCAGACCTAAGCTTTGACTCATACCATTCCACCCAAACTGACTTGGGCCCATCCCTGGGAAAACCTGGTG AAACCTCTCCCCCAGACTCCAAATCATCTCCATCTGTCTTAATACATTCTTTAGGTAAATCCACTACTGA CAATGATGTCAGAATTCAGCAACTGCAAGAGATTTTGCAAGATCTACAGAAGAGATTAGAGAGCTCTGAA GCAGAGAGAAAACAGCTACAGGTCGAACTCCAATCCCGAAGGGCAGAACTGGTATGCTTAAACAACACTG AGATTTCAGAGAACAGCTCTGACCTCAGCCAGAAACTTAAAGAAACTCAGAGCAAATACGAGGAGGCTAT GAAAGAAGTCCTTAGTGTGCAGAAGCAGATGAAACTCGGTCTTGTCTCACCTGAAAGCATGGATAATTAT TCACATTTCCACGAGCTGAGGGTCACGGAAGAGGAAATAAATGTGCTAAAGCAGGATCTGCAGAATGCAT TAGAAGAAAGTGAAAGAAATAAAGAGAAAGTGAGAGAGTTAGAGGAAAAACTGGTAGAGAGGGAGAAAGG TACAGTGATTAAGCCACCTGTGGAAGAGTACGAGGAAATGAAAAGTTCATATTGCTCTGTTATTGAGAAT ATGAATAAGGAGAAAGCATTTTTGTTTGAGAAATACCAAGAAGCCCAAGAAGAAATCATGAAATTAAAAG ACACACTAAAAAGTCAGATGACACAGGAAGCCAGTGATGAAGCTGAGGACATGAAAGAAGCCATGAATAG GATGATAGATGAACTCAATAAACAGGTGAGCGAGCTGTCACAGCTGTACAAAGAAGCCCAGGCTGAGCTG GAGGATTACAGGAAGAGGAAATCTCTAGAGGATGTCACAGCTGAATATATCCATAAAGCAGAGCATGAGA AACTGATGCAATTGACAAACGTGTCCAGGGCTAAAGCAGAAGATGCACTGTCTGAAATGAAGTCTCAGTA TTCAAAAGTGTTGAATGAGTTGACCCAGCTCAAACAACTGGTGGATGCACAAAAAGAGAACTCTGTCTCT ATCACAGAACATTTGCAAGTGATAACCACGCTGCGGACTGCAGCAAAAGAGATGGAAGAAAAAATAAGCA ATCTTAAGGAACACCTTGCAAGCAAGGAAGTGGAAGTAGCAAAGCTGGAGAAACAACTCTTAGAAGAGAA AGCTGCTATGACTGATGCAATGGTACCTCGGTCTTCCTATGAAAAACTCCAGTCATCCTTAGAGAGTGAA GTGAGTGTGTTGGCATCGAAATTAAAGGAATCTGTGAAAGAGAAAGAGAAGGTCCATTCAGAGGTTGTCC AGATTAGAAGTGAGGTCTCACAGGTGAAAAGAGAAAAGGAAAATATTCAGACTCTCTTGAAATCCAAAGA GCAAGAAGTAAATGAACTTCTGCAAAAATTCCAGCAAGCTCAGGAAGAACTTGCAGAAATGAAAAGATAC GCTGAGAGCTCTTCAAAACTGGAGGAAGATAAAGATAAAAAGATAAATGAGATGTCGAAGGAAGTCACCA AATTGAAGGAGGCCTTGAACAGCCTCTCCCAGCTCTCCTACTCAACAAGCTCATCCAAAAGGCAGAGTCA GCAGCTGGAGGCGCTGCAGCAGCAAGTCAAACAGCTCCAGAACCAGCTGGCGGAATGCAAGAAACAACAC CAGGAGGTCATATCAGTTTACAGAATGCATCTTCTGTATGCTGTGCAGGGCCAGATGGATGAAGATGTCC AGAAAGTACTGAAGCAAATCCTTACCATGTGTAAAAACCAGTCTCAAAAGAAGTAA
Translation (951 aa):
MKSLKAKFRKSDTNEWNKNDDRLLQAVENGDAEKVASLLGKKGASATKHDSEGKTAFHLAAAKGHVECLR VMITHGVDVTAQDTTGHSALHLAAKNSHHECIRKLLQSKCPAESVDSSGKTALHYAAAQGCLQAVQILCE HKSPINLKDLDGNIPLLLAVQNGHSEICHFLLDHGADVNSRNKSGRTALMLACEIGSSNAVEALIKKGAD LNLVDSLGYNALHYSKLSENAGIQSLLLSKISQDADLKTPTKPKQLSDVSSPRSITSTPLSGKESVFFAE PPFKAEISSIRENKDRLSDSTTGADSLLDISSEADQQDLLSLLQAKVASLTLHNKELQDKLQAKSPKEAE ADLSFDSYHSTQTDLGPSLGKPGETSPPDSKSSPSVLIHSLGKSTTDNDVRIQQLQEILQDLQKRLESSE AERKQLQVELQSRRAELVCLNNTEISENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNY SHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIEN MNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASDEAEDMKEAMNRMIDELNKQVSELSQLYKEAQAEL EDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAEDALSEMKSQYSKVLNELTQLKQLVDAQKENSVS ITEHLQVITTLRTAAKEMEEKISNLKEHLASKEVEVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESE VSVLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQAQEELAEMKRY AESSSKLEEDKDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKRQSQQLEALQQQVKQLQNQLAECKKQH QEVISVYRMHLLYAVQGQMDEDVQKVLKQILTMCKNQSQKK

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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