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Report for CCDS5506.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5506.2 Public Homo sapiens 7 TNS3 24 110 108 CCDS HistoryNCBI Gene:64759Re-query CCDS DB by CCDS ID:5506.2Re-query CCDS DB by GeneID:64759See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 5506.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311160.14 ENSP00000312143.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311160.14Link to Ensembl Protein Viewer:ENSP00000312143.9Re-query CCDS DB by Nucleotide ID:ENST00000311160Re-query CCDS DB by Protein ID:ENSP00000312143
Original member Current member NCBI NM_022748.12 NP_073585.8 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022748.12Link to Protein Sequence:NP_073585.8Re-query CCDS DB by Nucleotide ID:NM_022748Re-query CCDS DB by Protein ID:NP_073585Link to BLAST:NP_073585.8

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_073585.8 1445 Q68CZ2-1 1445 100% 0 0

Chromosomal Locations for CCDS 5506.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 47278076 47278220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47280164 47280190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47280286 47280354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47283697 47283865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47291955 47292032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47292828 47292905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47293733 47293828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47297082 47297213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47302186 47302272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47302950 47303584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47304832 47305003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47344755 47344838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47344924 47345038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47346187 47346356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47368365 47369621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47396800 47396904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47400393 47400458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47400785 47400914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47411727 47411802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47413937 47413997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47415094 47415206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47424101 47424184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47428312 47428376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47435282 47435404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47437263 47437313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47439487 47439636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4338 nt):
ATGGAGGAGGGCCATGGGCTGGACCTCACTTACATCACGGAGCGCATCATCGCTGTGTCCTTCCCTGCCG
GCTGCTCTGAGGAGTCCTACCTGCACAACCTACAGGAGGTCACGCGCATGCTCAAGTCCAAGCACGGGGA
CAACTACCTGGTATTAAACCTTTCAGAAAAGAGATATGACCTTACGAAGCTTAACCCAAAGATCATGGAT
GTGGGCTGGCCAGAGCTCCACGCACCGCCCCTGGATAAGATGTGTACCATATGCAAGGCGCAGGAGTCCT
GGCTGAACAGCAACCTCCAGCATGTGGTCGTCATTCACTGCAGGGGCGGGAAAGGACGCATAGGAGTGGT
CATATCATCCTACATGCATTTCACCAACGTCTCAGCCAGCGCCGACCAGGCCCTTGACAGGTTTGCAATG
AAGAAGTTTTATGATGACAAAGTTTCAGCTTTAATGCAGCCTTCCCAAAAACGGTATGTTCAGTTCCTCA
GTGGGCTCCTGTCCGGATCGGTGAAAATGAATGCCTCTCCCCTGTTCCTGCATTTTGTCATCCTCCACGG
CACCCCCAACTTCGACACAGGTGGAGTGTGCCGGCCCTTTCTGAAGCTCTACCAAGCCATGCAGCCTGTG
TACACCTCCGGGATCTACAACGTTGGCCCAGAAAACCCCAGCAGGATCTGCATCGTCATCGAGCCGGCCC
AGCTTCTGAAGGGAGATGTCATGGTGAAATGCTACCACAAGAAATACCGCTCGGCCACCCGTGACGTCAT
TTTCCGCCTGCAGTTTCACACTGGGGCTGTGCAGGGCTACGGGCTGGTGTTTGGGAAGGAGGATCTGGAC
AATGCCAGCAAAGATGACCGTTTTCCTGACTATGGGAAGGTTGAATTAGTCTTCTCTGCCACGCCTGAGA
AGATTCAAGGGTCCGAACACTTGTACAACGACCACGGTGTGATTGTGGACTACAACACAACAGACCCACT
GATACGCTGGGACTCGTACGAGAACCTCAGTGCAGATGGAGAAGTGCTACACACGCAGGGCCCTGTCGAT
GGCAGCCTTTACGCGAAGGTGAGGAAGAAAAGCTCCTCGGATCCTGGCATCCCAGGTGGCCCCCAGGCAA
TCCCGGCCACCAACAGCCCAGACCACAGTGACCACACCTTGTCTGTCAGCAGTGACTCCGGCCACTCTAC
AGCCTCTGCCAGGACGGATAAGACGGAAGAGCGCCTGGCCCCAGGAACCAGGAGGGGCCTGAGTGCCCAG
GAGAAGGCAGAGTTGGACCAGCTGCTCAGTGGCTTTGGCCTGGAAGATCCTGGAAGCTCCCTCAAGGAAA
TGACTGATGCTCGAAGCAAGTACAGTGGGACCCGCCACGTGGTGCCAGCCCAGGTTCACGTGAATGGAGA
CGCTGCTCTGAAGGATCGGGAGACAGACATTCTGGATGACGAGATGCCCCACCACGACCTGCACAGTGTG
GACAGCCTTGGGACCCTGTCCTCCTCGGAAGGGCCTCAGTCGGCCCACCTGGGTCCCTTCACCTGCCACA
AGAGCAGCCAGAACTCACTCCTATCTGACGGTTTTGGCAGCAACGTTGGTGAAGATCCGCAGGGCACCCT
CGTTCCGGACCTGGGCCTTGGCATGGACGGCCCCTATGAGCGGGAGCGGACTTTTGGGAGTCGAGAGCCC
AAGCAGCCCCAGCCCCTGCTGAGAAAGCCCTCAGTGTCCGCCCAGATGCAGGCCTATGGGCAGAGCAGCT
ACTCCACACAGACCTGGGTGCGCCAGCAGCAGATGGTTGTAGCTCACCAGTATAGCTTCGCCCCAGATGG
GGAGGCCCGGCTGGTGAGCCGCTGCCCTGCAGACAATCCTGGCCTCGTCCAGGCCCAGCCCAGAGTGCCA
CTCACCCCCACCCGAGGGACCAGCAGTAGGGTGGCTGTCCAGAGGGGTGTAGGCAGTGGGCCACATCCCC
CTGACACACAGCAGCCCTCTCCCAGCAAAGCGTTCAAACCCAGGTTTCCAGGAGACCAGGTTGTGAATGG
AGCCGGCCCAGAGCTGAGCACAGGCCCCTCCCCAGGCTCGCCCACCCTGGACATCGACCAGTCCATCGAG
CAGCTCAACAGGCTGATCCTGGAGCTGGATCCCACCTTCGAGCCCATCCCTACCCACATGAACGCCCTCG
GTAGCCAGGCCAATGGCTCTGTGTCTCCAGACAGCGTGGGAGGTGGGCTCCGGGCAAGCAGCAGGCTGCC
TGACACAGGAGAGGGCCCCAGCAGGGCCACCGGGCGGCAAGGCTCCTCTGCTGAACAGCCCCTGGGCGGG
AGACTCAGGAAGCTGAGCCTGGGGCAGTACGACAACGATGCTGGGGGGCAGCTGCCCTTCTCCAAATGTG
CATGGGGAAAGGCTGGTGTGGACTATGCCCCAAACCTGCCGCCATTCCCCTCACCAGCGGACGTCAAAGA
GACGATGACCCCTGGCTATCCCCAGGACCTCGATATTATCGATGGCAGAATTTTAAGTAGCAAGGAGTCC
ATGTGTTCAACTCCAGCATTTCCTGTGTCTCCAGAGACACCGTATGTGAAAACAGCGCTGCGCCATCCTC
CGTTCAGCCCACCTGAGCCCCCGCTGAGCAGCCCAGCCAGTCAGCACAAAGGAGGACGTGAACCACGAAG
CTGCCCTGAGACGCTCACTCACGCTGTGGGGATGTCAGAGAGCCCCATCGGACCCAAATCCACGATGCTC
CGGGCTGATGCGTCCTCGACGCCCTCCTTTCAGCAGGCTTTTGCTTCTTCCTGCACCATTTCCAGCAACG
GCCCTGGGCAGAGGAGAGAGAGCTCCTCTTCTGCAGAACGCCAGTGGGTGGAGAGCAGCCCCAAGCCCAT
GGTTTCCCTGCTGGGGAGCGGCCGGCCCACCGGAAGTCCCCTCAGCGCTGAGTTCTCCGGTACCAGGAAG
GACTCCCCAGTGCTGTCCTGCTTCCCGCCGTCAGAGCTCCAGGCTCCTTTCCACAGCCATGAGCTGTCCC
TAGCAGAGCCACCGGACTCCCTGGCGCCTCCCAGCAGCCAGGCCTTCCTGGGCTTCGGCACCGCCCCAGT
GGGAAGTGGCCTTCCGCCCGAGGAGGACCTGGGGGCCTTGCTGGCCAATTCTCATGGAGCGTCACCGACC
CCCAGCATCCCGCTGACAGCGACAGGGGCTGCCGACAATGGCTTCCTGTCCCACAACTTTCTCACGGTGG
CGCCTGGACACAGCAGCCACCACAGTCCAGGCCTGCAGGGCCAGGGTGTGACCCTGCCCGGGCAGCCACC
CCTCCCTGAGAAGAAGCGGGCCTCGGAGGGGGATCGTTCTTTGGGCTCAGTCTCTCCCTCCTCCAGTGGC
TTCTCCAGCCCGCACAGCGGGAGCACCATCAGTATCCCCTTCCCAAATGTCCTTCCCGACTTTTCCAAGG
CTTCAGAAGCGGCCTCACCTCTGCCAGATAGTCCAGGTGATAAACTTGTGATCGTGAAATTTGTTCAAGA
CACTTCCAAGTTCTGGTACAAGGCGGATATTTCAAGAGAACAAGCCATCGCCATGTTGAAGGACAAGGAG
CCGGGCTCATTCATTGTTCGAGACAGCCATTCCTTCCGAGGGGCCTATGGCCTGGCCATGAAGGTGGCCA
CGCCCCCACCTTCAGTCCTGCAGCTGAACAAGAAAGCTGGAGATTTGGCCAATGAACTCGTCCGGCACTT
TTTGATCGAGTGTACCCCGAAGGGAGTGCGGTTGAAAGGGTGCTCGAATGAACCATATTTCGGGAGCCTG
ACGGCCTTGGTGTGCCAGCATTCCATCACGCCCTTGGCCTTGCCGTGCAAGCTGCTTATCCCAGAGAGAG
ATCCATTGGAGGAAATAGCAGAAAGTTCTCCCCAGACGGCAGCCAATTCAGCAGCTGAGCTGTTGAAGCA
GGGGGCAGCCTGCAATGTGTGGTACTTGAACTCTGTGGAGATGGAGTCCCTCACCGGCCACCAGGCGATC
CAGAAGGCCCTGAGCATCACCCTGGTCCAGGAGCCTCCACCTGTGTCCACAGTTGTGCACTTCAAGGTGT
CAGCCCAGGGCATCACCCTGACAGACAATCAGAGGAAGCTCTTCTTCCGGAGGCATTACCCCGTGAACAG
TGTGATTTTCTGTGCCTTGGACCCACAAGACAGGAAGTGGATCAAAGATGGCCCTTCCTCAAAAGTCTTT
GGATTTGTGGCCCGGAAGCAGGGCAGTGCCACGGATAATGTGTGCCACCTGTTTGCAGAGCATGACCCTG
AGCAGCCTGCCAGTGCCATTGTCAACTTCGTATCAAAGGTCATGATTGGTTCCCCAAAGAAGGTCTGA

Translation (1445 aa):
MEEGHGLDLTYITERIIAVSFPAGCSEESYLHNLQEVTRMLKSKHGDNYLVLNLSEKRYDLTKLNPKIMD
VGWPELHAPPLDKMCTICKAQESWLNSNLQHVVVIHCRGGKGRIGVVISSYMHFTNVSASADQALDRFAM
KKFYDDKVSALMQPSQKRYVQFLSGLLSGSVKMNASPLFLHFVILHGTPNFDTGGVCRPFLKLYQAMQPV
YTSGIYNVGPENPSRICIVIEPAQLLKGDVMVKCYHKKYRSATRDVIFRLQFHTGAVQGYGLVFGKEDLD
NASKDDRFPDYGKVELVFSATPEKIQGSEHLYNDHGVIVDYNTTDPLIRWDSYENLSADGEVLHTQGPVD
GSLYAKVRKKSSSDPGIPGGPQAIPATNSPDHSDHTLSVSSDSGHSTASARTDKTEERLAPGTRRGLSAQ
EKAELDQLLSGFGLEDPGSSLKEMTDARSKYSGTRHVVPAQVHVNGDAALKDRETDILDDEMPHHDLHSV
DSLGTLSSSEGPQSAHLGPFTCHKSSQNSLLSDGFGSNVGEDPQGTLVPDLGLGMDGPYERERTFGSREP
KQPQPLLRKPSVSAQMQAYGQSSYSTQTWVRQQQMVVAHQYSFAPDGEARLVSRCPADNPGLVQAQPRVP
LTPTRGTSSRVAVQRGVGSGPHPPDTQQPSPSKAFKPRFPGDQVVNGAGPELSTGPSPGSPTLDIDQSIE
QLNRLILELDPTFEPIPTHMNALGSQANGSVSPDSVGGGLRASSRLPDTGEGPSRATGRQGSSAEQPLGG
RLRKLSLGQYDNDAGGQLPFSKCAWGKAGVDYAPNLPPFPSPADVKETMTPGYPQDLDIIDGRILSSKES
MCSTPAFPVSPETPYVKTALRHPPFSPPEPPLSSPASQHKGGREPRSCPETLTHAVGMSESPIGPKSTML
RADASSTPSFQQAFASSCTISSNGPGQRRESSSSAERQWVESSPKPMVSLLGSGRPTGSPLSAEFSGTRK
DSPVLSCFPPSELQAPFHSHELSLAEPPDSLAPPSSQAFLGFGTAPVGSGLPPEEDLGALLANSHGASPT
PSIPLTATGAADNGFLSHNFLTVAPGHSSHHSPGLQGQGVTLPGQPPLPEKKRASEGDRSLGSVSPSSSG
FSSPHSGSTISIPFPNVLPDFSKASEAASPLPDSPGDKLVIVKFVQDTSKFWYKADISREQAIAMLKDKE
PGSFIVRDSHSFRGAYGLAMKVATPPPSVLQLNKKAGDLANELVRHFLIECTPKGVRLKGCSNEPYFGSL
TALVCQHSITPLALPCKLLIPERDPLEEIAESSPQTAANSAAELLKQGAACNVWYLNSVEMESLTGHQAI
QKALSITLVQEPPPVSTVVHFKVSAQGITLTDNQRKLFFRRHYPVNSVIFCALDPQDRKWIKDGPSSKVF
GFVARKQGSATDNVCHLFAEHDPEQPASAIVNFVSKVMIGSPKKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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