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Report for CCDS55122.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55122.1 Public Homo sapiens 7 CFAP69 24 110 108 CCDS HistoryNCBI Gene:79846Re-query CCDS DB by CCDS ID:55122.1Re-query CCDS DB by GeneID:79846See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55122.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000497910.5 ENSP00000419549.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000497910.5Link to Ensembl Protein Viewer:ENSP00000419549.1Re-query CCDS DB by Nucleotide ID:ENST00000497910Re-query CCDS DB by Protein ID:ENSP00000419549
Original member Current member NCBI NM_001160138.2 NP_001153610.1 Accepted alive Link to Nucleotide Sequence:NM_001160138.2Link to Protein Sequence:NP_001153610.1Re-query CCDS DB by Nucleotide ID:NM_001160138Re-query CCDS DB by Protein ID:NP_001153610Link to BLAST:NP_001153610.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001153610.1 923 A5D8W1-5 923 100% 0 0

Chromosomal Locations for CCDS 55122.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 90245425 90245544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90255423 90255482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90258098 90258163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90261947 90262056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90265301 90265377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90268286 90268330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90271526 90271675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90271781 90271958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90273987 90274110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90277073 90277121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90277213 90277334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90279677 90279893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90282892 90283056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90286281 90286399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90288234 90288352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90297749 90297830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90299867 90300059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90303969 90304106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90304744 90304820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90306901 90307098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90307768 90307854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90309263 90309367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90310068 90310238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2772 nt):
ATGTGGACAGAGGAAGCCGGGGCGACCGCCGAGGCCCAGGAATCCGGCATCAGGAACAAGTCTAGCAGTT
CCAGTCAAATCCCGGTGGTTGGGGTGGTGACGGAGGACGATGAGGCGCAGGATGTTTTCAAGCCTATGGA
CCTTAATCGTGTCATCAAACTCCTCGAAGAGACTGATAAAGATGGCTTGGAAGAAAAACAACTTAAATTT
GTCAAGAAACTGGTACAGTGTTATCAGAATGGACTTCCATTAAGGGATTTAGCACAGATATTTAAAATTC
TGAATCTGTGTTCAGGAAAAATAAAAAACCAGCCTCGTTTTATAGAATCTGCATATGATATCATAAAACT
GTGTGGCTTGCCATTTTTGAAAAAGAAAGTGTCGGATGAAATAACTTATGCTGAAGATACTGCTAATTCA
ATTGCACTTCTGGGTGACTTAATGAAAATACCAAGTTCTGAATTGAGGATACAAATTTGTTACCAGCAAG
CGAGTTCATCATACAAGATTCAAATGGCTGAAGTTGGAGGATTAGCAAAAACAATGGTCCAGTCAATGAC
CTTGCTTGAAAATCAACTTGTTGAGAAACTTTGGGTACTTAAAGTTCTGCAGCATCTCTCAACTTCTGAA
GTTAATTGTACTATAATGATGAAAGCACAAGCAGCCAGTGGAATCTGTACTCACCTCAATGACCCAGATC
CCTCTGGACAGCTTTTATTTCGTTCATCAGAAATACTTTGGAACTTGCTGGAAAAATCTTCAAAAGAAGA
AGTCATACAACAGCTTAGTAACTTGGAATGTTTGCTGGCTTTGAAGGAAGTATTTAAAAATCTGTTTATG
AGAGGTTTCAGTCATTATGACCGTCAGCTTAGAAATGACATATTAGTGATCACTACAATTATAGCTCAAA
ATCCTGAAGCACCAATGATTGAATGTGGCTTTACCAAGGATTTGATACTGTTTGCCACCTTTAATGAAGT
TAAAAGTCAAAATCTTTTGGTAAAAGGACTTAAGCTTTCTAATTCCTATGAAGATTTTGAGTTGAAGAAA
TTACTATTCAACGTAATTGTGATCTTATGTAAAGATTTACCTACTGTACAGCTATTAATTGATGGCAAAG
TTATTTTGGCTTTGTTTACCTATGTTAAGAAGCCTGAGAAGCAAAAAATAATTGACTGGTCTGCAGCACA
GCATGAAGAATTACAACTGCATGCAATTGCCACTTTGTCATCAGTGGCTCCTTTATTAATAGAAGAATAC
ATGTCATGCCAGGGAAATGCTCGAGTCCTTGCATTTCTAGAATGGTGTGAGAGTGAAGATCCGTTTTTCA
GTCATGGTAACAGTTTTCATGGTACAGGTGGCCGAGGCAACAAGTTTGCCCAGATGCGTTACAGTTTAAG
ACTCCTGAGAGCCGTGGTCTACCTTGAAGATGAGACTGTAAACAAAGATCTTTGTGAAAAGGGAACAATT
CAGCAAATGATAGGAATCTTTAAAAATATAATAAGCAAGCCTAATGAAAAGGAAGAAGCCATTGTTTTGG
AAATCCAGTCTGATATATTACTTATCCTATCTGGCCTTTGTGAGAATCACATTCAAAGGAAGGAAATTTT
CGGAACTGAAGGAGTAGATATCGTTCTTCATGTGATGAAAACAGACCCCAGGAAGTTACAGAGTGGCTTA
GGCTATAATGTACTTCTTTTTAGTACATTGGACAGCATTTGGTGCTGTATTTTGGGATGTTATCCCTCAG
AGGATTATTTTCTTGAAAAGGAAGGCATTTTTCTCCTTTTGGATTTGTTAGCATTGAACCAAAAAAAATT
CTGTAATCTAATACTTGGAATAATGGTTGAATTTTGTGATAATCCCAAAACTGCAGCTCATGTCAATGCT
TGGCAAGGGAAGAAGGATCAGACAGCTGCTAGTCTTTTAATTAAATTGTGGAGAAAGGAGGAAAAAGAAC
TAGGAGTAAAACGTGATAAAAATGGGAAGATCATTGATACAAAAAAACCTCTATTTACTAGCTTTCAAGA
AGAGCAAAAAATCATCCCACTGCCTGCTAACTGCCCATCTATTGCGGTTATGGATGTTTCTGAGAATATT
AGAGCAAAAATTTATGCTATATTGGGCAAACTAGATTTTGAAAATTTACCTGGCCTATCTGCTGAAGATT
TTGTCACCCTTTGTATCATACATAGATATCTTGATTTTAAAATTGGAGAAATATGGAATGAAATATATGA
AGAAATAAAATTAGAAAAATTAAGACCAGTCACTACAGATAAAAAAGCTTTGGAAGCTATTACAACAGCA
TCAGAAAATATTGGAAAGATGGTTGCTTCTCTGCAAAGTGATATAATTGAAAGCCAAGCATGCCAAGACA
TGCAAAATGAACAAAAAGTATATGCAAAAATACAGGCCACGCACAAGCAAAGAGAGCTGGCTAATAAATC
ATGGGAAGATTTCTTGGCTAGAACATCAAACGCTAAAACGTTAAAGAAAGCAAAAAGCCTTCAAGAAAAA
GCTATAGAAGCCTCCAGATACCATAAACGACCACAAAATGCAATATTTCACCAAACACATATTAAAGGCC
TTAACACAACGGTGCCCTCTGGTGGAGTAGTAACAGTGGAAAGCACTCCTGCCCGATTAGTAGGAGGACC
TCTGGTTGATACGGATATTGCTCTTAAAAAACTGCCCATTCGAGGAGGAGCCTTGCAGAGGGTGAAAGCA
GTTAAAATTGTGGATGCACCAAAAAAGAGTATTCCTACGTAA

Translation (923 aa):
MWTEEAGATAEAQESGIRNKSSSSSQIPVVGVVTEDDEAQDVFKPMDLNRVIKLLEETDKDGLEEKQLKF
VKKLVQCYQNGLPLRDLAQIFKILNLCSGKIKNQPRFIESAYDIIKLCGLPFLKKKVSDEITYAEDTANS
IALLGDLMKIPSSELRIQICYQQASSSYKIQMAEVGGLAKTMVQSMTLLENQLVEKLWVLKVLQHLSTSE
VNCTIMMKAQAASGICTHLNDPDPSGQLLFRSSEILWNLLEKSSKEEVIQQLSNLECLLALKEVFKNLFM
RGFSHYDRQLRNDILVITTIIAQNPEAPMIECGFTKDLILFATFNEVKSQNLLVKGLKLSNSYEDFELKK
LLFNVIVILCKDLPTVQLLIDGKVILALFTYVKKPEKQKIIDWSAAQHEELQLHAIATLSSVAPLLIEEY
MSCQGNARVLAFLEWCESEDPFFSHGNSFHGTGGRGNKFAQMRYSLRLLRAVVYLEDETVNKDLCEKGTI
QQMIGIFKNIISKPNEKEEAIVLEIQSDILLILSGLCENHIQRKEIFGTEGVDIVLHVMKTDPRKLQSGL
GYNVLLFSTLDSIWCCILGCYPSEDYFLEKEGIFLLLDLLALNQKKFCNLILGIMVEFCDNPKTAAHVNA
WQGKKDQTAASLLIKLWRKEEKELGVKRDKNGKIIDTKKPLFTSFQEEQKIIPLPANCPSIAVMDVSENI
RAKIYAILGKLDFENLPGLSAEDFVTLCIIHRYLDFKIGEIWNEIYEEIKLEKLRPVTTDKKALEAITTA
SENIGKMVASLQSDIIESQACQDMQNEQKVYAKIQATHKQRELANKSWEDFLARTSNAKTLKKAKSLQEK
AIEASRYHKRPQNAIFHQTHIKGLNTTVPSGGVVTVESTPARLVGGPLVDTDIALKKLPIRGGALQRVKA
VKIVDAPKKSIPT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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