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Report for CCDS55232.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55232.1 Public Homo sapiens 8 CHCHD7 24 110 108 CCDS HistoryNCBI Gene:79145Re-query CCDS DB by CCDS ID:55232.1Re-query CCDS DB by GeneID:79145See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55232.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000518801.5 ENSP00000428274.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000518801.5Link to Ensembl Protein Viewer:ENSP00000428274.1Re-query CCDS DB by Nucleotide ID:ENST00000518801Re-query CCDS DB by Protein ID:ENSP00000428274
Original member Current member EBI ENST00000521524.5 ENSP00000430458.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000521524.5Link to Ensembl Protein Viewer:ENSP00000430458.1Re-query CCDS DB by Nucleotide ID:ENST00000521524Re-query CCDS DB by Protein ID:ENSP00000430458
Original member Current member NCBI NM_001011669.3 NP_001011669.1 Accepted alive Link to Nucleotide Sequence:NM_001011669.3Link to Protein Sequence:NP_001011669.1Re-query CCDS DB by Nucleotide ID:NM_001011669Re-query CCDS DB by Protein ID:NP_001011669Link to BLAST:NP_001011669.1
Original member Current member NCBI NM_001317858.2 NP_001304787.1 Accepted alive Link to Nucleotide Sequence:NM_001317858.2Link to Protein Sequence:NP_001304787.1Re-query CCDS DB by Nucleotide ID:NM_001317858Re-query CCDS DB by Protein ID:NP_001304787Link to BLAST:NP_001304787.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001011669.1 68 Q9BUK0-3 68 100% 0 0
NP_001304787.1 68 Q9BUK0-3 68 100% 0 0

Chromosomal Locations for CCDS 55232.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 56212870 56212889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 56214598 56214667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 56216389 56216505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (207 nt):
ATGCACCAAACTCGAACTGGTAAGAAGACTGTTAGAATGCCCTCGGTAACACAGAGGCTGAGAGATCCTG
ACATAAATCCTTGTTTGTCGATCCTGTTCTACCTTTTAAATGATGCCTCTCTTATATCTGTAAGGAATCT
GATGCTTCCACCAGATGTCTGGATGAAAATAACTATGACAGGGAAAGGTGTTCCACTTACTTCTTGA

Translation (68 aa):
MHQTRTGKKTVRMPSVTQRLRDPDINPCLSILFYLLNDASLISVRNLMLPPDVWMKITMTGKGVPLTS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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