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Report for CCDS55439.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55439.1 Public Homo sapiens X DLG3 24 110 108 CCDS HistoryNCBI Gene:1741Re-query CCDS DB by CCDS ID:55439.1Re-query CCDS DB by GeneID:1741See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 55439.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000542398.1 ENSP00000441393.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000542398.1Link to Ensembl Protein Viewer:ENSP00000441393.1Re-query CCDS DB by Nucleotide ID:ENST00000542398Re-query CCDS DB by Protein ID:ENSP00000441393
Original member Current member NCBI NM_001166278.2 NP_001159750.1 Accepted alive Link to Nucleotide Sequence:NM_001166278.2Link to Protein Sequence:NP_001159750.1Re-query CCDS DB by Nucleotide ID:NM_001166278Re-query CCDS DB by Protein ID:NP_001159750Link to BLAST:NP_001159750.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001159750.1 366 Q92796-3 366 100% 0 0

Chromosomal Locations for CCDS 55439.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 70479194 70479264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70492107 70492283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70492521 70492596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70493376 70493475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70497180 70497221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70498520 70498570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70499176 70499277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70499877 70500049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70500471 70500580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70500898 70500989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70502163 70502269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1101 nt):
ATGATGAACAGCAGCATGAGCTCTGGGTCTGGGTCCCTCCGAACAAGTGAAAAGAGGTCCTTGTATGTCA
GGGCCCTGTTTGATTATGATCGGACTCGGGACAGCTGCCTGCCAAGCCAGGGGCTCAGCTTCTCTTATGG
TGACATTCTGCATGTCATTAATGCCTCTGATGATGAGTGGTGGCAGGCAAGGCTGGTGACCCCACACGGA
GAAAGTGAGCAGATCGGTGTGATCCCCAGTAAGAAGAGGGTGGAAAAGAAAGAAAGAGCTCGATTGAAAA
CTGTGAAGTTCCATGCCAGGACGGGGATGATTGAGTCTAACAGGTCGATCAAAACGAAACGTAAAAAGAG
TTTCCGCCTCTCTCGAAAGTTTCCATTTTACAAGAGCAAAGAAAACATGGCCCAGGAGAGCAGCATACAG
GAACAGGGAGTGACATCCAACACCAGTGACAGCGAAAGCAGTTCCAAAGGACAAGAGGATGCTATTTTGT
CATATGAGCCAGTGACACGGCAAGAAATTCACTATGCAAGGCCTGTGATCATCCTGGGCCCAATGAAGGA
CCGAGTCAATGATGACCTGATCTCCGAATTTCCACATAAATTTGGATCCTGTGTGCCACATACTACCCGG
CCTCGACGTGATAATGAGGTGGATGGACAAGACTACCACTTTGTGGTGTCCCGAGAACAAATGGAGAAAG
ATATTCAGGACAACAAGTTCATCGAGGCGGGCCAATTTAATGATAACCTCTATGGGACCAGCATCCAGTC
AGTGCGGGCAGTTGCAGAGAGGGGCAAGCACTGCATCTTAGATGTTTCCGGCAATGCTATCAAGAGACTG
CAGCAAGCACAACTTTACCCCATTGCCATTTTCATCAAGCCCAAGTCCATTGAAGCCCTTATGGAAATGA
ACCGAAGGCAGACATATGAACAAGCAAATAAGATCTATGACAAAGCCATGAAACTGGAGCAGGAATTTGG
AGAGTACTTTACAGCCATTGTACAGGGTGACTCACTGGAAGAGATTTATAACAAAATCAAACAAATCATT
GAGGACCAGTCTGGGCACTACATTTGGGTCCCATCCCCTGAAAAACTCTGA

Translation (366 aa):
MMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHG
ESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRSIKTKRKKSFRLSRKFPFYKSKENMAQESSIQ
EQGVTSNTSDSESSSKGQEDAILSYEPVTRQEIHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTR
PRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRL
QQAQLYPIAIFIKPKSIEALMEMNRRQTYEQANKIYDKAMKLEQEFGEYFTAIVQGDSLEEIYNKIKQII
EDQSGHYIWVPSPEKL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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