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Report for CCDS55470.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55470.1 Public Homo sapiens X RADX 24 110 108 CCDS HistoryNCBI Gene:55086Re-query CCDS DB by CCDS ID:55470.1Re-query CCDS DB by GeneID:55086See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 55470.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372544.6 ENSP00000361623.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372544.6Link to Ensembl Protein Viewer:ENSP00000361623.2Re-query CCDS DB by Nucleotide ID:ENST00000372544Re-query CCDS DB by Protein ID:ENSP00000361623
Original member Current member NCBI NM_001184782.2 NP_001171711.1 Accepted alive Link to Nucleotide Sequence:NM_001184782.2Link to Protein Sequence:NP_001171711.1Re-query CCDS DB by Nucleotide ID:NM_001184782Re-query CCDS DB by Protein ID:NP_001171711Link to BLAST:NP_001171711.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171711.1 758 Q6NSI4-4 758 100% 0 0

Chromosomal Locations for CCDS 55470.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 106612081 106612723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106622651 106622793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106625090 106625282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106632625 106632733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106632932 106633023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106633130 106633252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106636543 106636647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106637760 106637794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106640552 106640721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106648313 106648386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106662015 106662305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106669163 106669330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106678128 106678258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2277 nt):
ATGTCTGGTGAGTCAGGACAGCCTGAGGCTGGTCCCTCACATGCAGGGCTAGATTGGCCGAACCCTGAGA
GGAATCGGGCTGGGGTCCCGGGAGGGGTGATCCGAAGAGCTGGTTCCCAAGGGCCCAGGTCCTGGATCCA
AAAGGTTCTTGAGCAGATTATGGACTCACCTCGCCAGTGTGTCACCCCCTCGGAGGTGGTGCCTGTAACT
GTGCTGGCCGTCCAGAGGTACCTGTTAGAGGATGAGCCACGCGACACGGTGCCCAAGCCTCCCCTTTATT
GCTATGATGTGACGATCTCAGATGGGGTGTACCAGGAGAAGTGCTACCTGGACCCCAGCTTGAACTCTCT
CGTATATCAAAATATTCTTAAAGTTGGCATTCAAATGAGAATTTCCAGGGTCTCATGTCTTTACAATGAG
AAAAGGATAGGCCAGGGGATCCTGTGCATAGATAACGTCCACTGTGGGGAGACTTCAGACAGTATTTCTT
TAGAAACTCCCTTCAGAAATAGAGCGCACCAGGAGAAACCAGAGAGGCCTTTAAGAGGCGGGAAGAGTCA
TTACCTGGCGCTGTGGAATAACGAAGATCCCTATGGAGATATCTGGTTAACAGACAAGCAACCTGAGGAA
CACAACTTTAGCGATACCAAAATAATTTCCCTTTCTCATCTTGAAATGACCTGGACTAACAGAAGAAATT
TTCCTGCATTGCTTGTGAGGATCTTACATAAATCAAAACTGCGATACTATGGAAAACCTGATAAAAAGAT
GATTGAACCATATCAGACCTTTTTGGAAGTTGCTGACAGTTCAGGCACAGTGTCAGTGATTATGTGGAAT
GCCCTGTGTCCTGAGTGGTATAAAAGTTTGCGGGTTGGTTTAGTTCTTCTGCTTCAAGACTATTCTGTTA
AAAAGAGTTATCCATTCAGAATACAGCCTGTCCCCGTGGATCCACAGATCAAACTAATTTCTACAATGGA
AATCTGCCTGAATCTTCGAGATCCCCCAACAAATATAATTATCATTCCAGAAAAGCAGGTGAAACCAGAA
TGGAGACTGCCAAAGCTAAATCACCGATTTACCACAAGGTCAGAACTGGATGATATGCCAGAAAATTGCA
TCTGTGATGTTATTGGCCTTTTAGTTTTTGTAGGAAGGGTCCAGCGGTCAAAAAAGAAAGAAAACCGTGA
AGATTTTTGGTCATATCGCTGGATTCACATTGCTGACGGTACTTCAGAACAACCATTTATAGTGGAACTG
TTTTCAACATCGCAGCCAGAAATCTTTGAAAATATTTACCCAATGGCATATTTTGTGTGTACACAGTTGA
AAGTTGTCAGAAATGACAATCAAGTACCTAAGCTGCTTTACCTCACCACTACAAATGAGAGTGGAGTGTT
TATTACTGGTCATAGAGGCCAGCCGTATACGTATGATGCCAAGAATGCTAACAGACCCTCGACCTCTCAA
GCAGCTAGAGTAGAAATTCAAGAAAGAAATGGTAAACGGCATCAAGATGATGAGCCTGTGAATTCTCAGT
ATTTCCAAACTACATCTACAAATTTAAGTCTGAGCAATAAAATAAGAATTCTTCAAGGCCCACACGCTAA
TCCAGTTGCTGTACCTCAACCAGGAGCTTCTGTACAAACAAAGGGAATTAAACCGGGCATGCCAAGCATC
TTCAACCGTCGAGCAAATATAAATGCTAATCTGCAAGGGAAAGCCAGAAAAACTATAAGTGATAGGTGGG
AGAGTCAGCTGTGGAGAGAGAAAAAGTTTGGCTTAATAGATCACCTACACTACAGCCGTGTTTATCCTGA
AAGTATTCCACGGAAATTTATGTTTGAACACAGAAAGTTTCTTAGTGACCAGTATAATTCTCAGCCTGCG
AAATATGTACCACCAGAAGGAAGGCCCCCAAAACTTGATGATTTTAAGAGCGCCCGAAGCCTTGGACATT
TTGAAGTAACCATACTAGGTCTGAACCATGAGATAGCAATCGATGTTGCTTTCCTACCCATGTATTGTCC
AGAAGATATTCGAACATCTCAAATAGACACACTGTTGACCTCCATGAATTACAGCTGTGCATATCCACAG
GACACAACTGGAAATGACCGATTGCCAGGTCCAAGAGCGGTTGCAGGTGATATTATAAAAGCAGCAACTG
AACTGGATAGAGTGCATATCGTCGGTATCTTGGATATCTGTAATTTGGGTAATAATAAAGTGGAAGTCTA
TTTGCACAAGATTTATAGTCCAGAGAATACTTCTTAA

Translation (758 aa):
MSGESGQPEAGPSHAGLDWPNPERNRAGVPGGVIRRAGSQGPRSWIQKVLEQIMDSPRQCVTPSEVVPVT
VLAVQRYLLEDEPRDTVPKPPLYCYDVTISDGVYQEKCYLDPSLNSLVYQNILKVGIQMRISRVSCLYNE
KRIGQGILCIDNVHCGETSDSISLETPFRNRAHQEKPERPLRGGKSHYLALWNNEDPYGDIWLTDKQPEE
HNFSDTKIISLSHLEMTWTNRRNFPALLVRILHKSKLRYYGKPDKKMIEPYQTFLEVADSSGTVSVIMWN
ALCPEWYKSLRVGLVLLLQDYSVKKSYPFRIQPVPVDPQIKLISTMEICLNLRDPPTNIIIIPEKQVKPE
WRLPKLNHRFTTRSELDDMPENCICDVIGLLVFVGRVQRSKKKENREDFWSYRWIHIADGTSEQPFIVEL
FSTSQPEIFENIYPMAYFVCTQLKVVRNDNQVPKLLYLTTTNESGVFITGHRGQPYTYDAKNANRPSTSQ
AARVEIQERNGKRHQDDEPVNSQYFQTTSTNLSLSNKIRILQGPHANPVAVPQPGASVQTKGIKPGMPSI
FNRRANINANLQGKARKTISDRWESQLWREKKFGLIDHLHYSRVYPESIPRKFMFEHRKFLSDQYNSQPA
KYVPPEGRPPKLDDFKSARSLGHFEVTILGLNHEIAIDVAFLPMYCPEDIRTSQIDTLLTSMNYSCAYPQ
DTTGNDRLPGPRAVAGDIIKAATELDRVHIVGILDICNLGNNKVEVYLHKIYSPENTS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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