CCDS Report for Consensus CDS

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Report for CCDS55684.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
55684.1	Public	Homo sapiens	1	INTS7	24	110	108

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55684.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000366992.7	ENSP00000355959.3		Accepted	alive
		NCBI	NM_001199812.2	NP_001186741.1		Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001186741.1	942	Q9NVH2-3	942	100%	0	0

Chromosomal Locations for CCDS 55684.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)

Genome Browser links:

Chromosome	Start	Stop
1	211941824	211942111
1	211944784	211944969
1	211946607	211946645
1	211952569	211952701
1	211966430	211966498
1	211967878	211967981
1	211968513	211968707
1	211975166	211975372
1	211976582	211976719
1	211978272	211978511
1	211981093	211981190
1	211982676	211982810
1	211987886	211988003
1	212006639	212006761
1	212007250	212007449
1	212011375	212011421
1	212016886	212017023
1	212020122	212020268
1	212021083	212021212
1	212035344	212035437

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2829 nt):
ATGGCGTCAAACTCAACTAAGTCTTTCCTGGCAGATGCCGGCTATGGCGAACAGGAACTGGATGCCAACT CTGCCCTTATGGAATTGGACAAAGGCCTAAGATCTGGCAAACTTGGTGAACAGTGTGAAGCAGTTGTTCG CTTTCCCAGACTTTTTCAGAAGTATCCATTCCCTATTCTTATCAATTCTGCATTCCTAAAGTTAGCTGAT GTTTTCAGAGTTGGAAATAATTTCCTGAGGCTATGTGTTCTTAAAGTTACCCAACAAAGTGAGAAACATT TGGAGAAGATTCTAAATGTGGATGAATTTGTGAAGAGAATTTTTTCTGTGATTCATAGTAATGATCCTGT GGCAAGAGCCATCACCCTCCGGATGTTGGGAAGTCTGGCATCAATAATTCCTGAGAGGAAGAATGCTCAT CATAGTATTCGTCAGAGTTTAGATTCACATGATAATGTAGAAGTTGAAGCTGCTGTTTTTGCTGCTGCAA ACTTCTCTGCACAGTCAAAGGATTTTGCTGTAGGAATCTGTAACAAAATCAGTGAAATGATTCAAGGTTT AGCGACACCAGTAGACTTGAAGCTAAAATTGATACCCATTCTACAGCACATGCACCATGATGCAATCTTG GCTTCCAGTGCTCGTCAGCTTTTACAACAGCTGGTCACATCCTATCCGTCCACCAAAATGGTGATTGTGT CTTTGCACACTTTCACTCTGCTTGCAGCGTCATCTTTGGTTGATACACCTAAGCAGATTCAGCTTCTGTT GCAGTATTTGAAGAATGATCCCAGGAAGGCAGTAAAGAGACTTGCTATTCAAGATCTGAAATTACTTGCT AATAAAACACCACATACTTGGAGTAGGGAGAATATTCAGGCACTTTGTGAGTGTGCCCTCCAGACTCCTT ATGACAGCTTAAAACTAGGGATGTTGTCTGTCCTTTCCACACTATCAGGGACCATCGCCATCAAACATTA CTTCAGTATAGTTCCAGGAAATGTGAGTTCTTCTCCCAGATCTTCTGATTTAGTCAAATTAGCCCAAGAG TGCTGTTACCATAATAACAGGGGCATTGCAGCTCATGGAGTTAGAGTCCTAACTAATATAACTGTTTCTT GTCAAGAAAAGGATCTTTTGGCACTGGAACAAGATGCTGTCTTTGGCCTGGAATCCCTACTGGTACTTTG TAGTCAAGATGATAGTCCAGGTGCTCAGGCCACTTTAAAGATTGCTCTAAACTGTATGGTGAAGTTGGCC AAGGGCAGGCCCCATCTTAGCCAGTCAGTAGTTGAGACCTTGTTGACTCAATTGCACAGTGCTCAAGACG CTGCCCGGATTTTGATGTGCCATTGCCTGGCAGCCATTGCCATGCAACTGCCGGTGCTGGGTGATGGGAT GCTTGGTGACCTCATGGAGCTGTACAAGGTGATTGGACGATCAGCCACAGACAAGCAACAAGAACTTCTG GTGAGTTTGGCTACTGTGATTTTTGTTGCAAGTCAGAAGGCATTGTCTGTGGAAAGTAAGGCAGTAATTA AGCAGCAGCTTGAAAGTGTCTCCAATGGATGGACTGTATACCGTATTGCCAGACAGGCTTCCAGAATGGG TAATCATGACATGGCCAAAGAGCTTTATCAGAGTTTGCTGACTCAGGTTGCCTCAGAACATTTCTACTTC TGGCTAAATAGTTTGAAGGAGTTTTCACATGCAGAACAGTGTCTCACTGGGTTGCAAGAGGAAAATTATA GTTCAGCACTTTCTTGCATTGCTGAATCTTTAAAATTCTATCACAAAGGGATTGCTTCCTTAACAGCAGC TAGTACACCACTGAATCCTTTAAGCTTTCAGTGTGAATTTGTAAAACTCAGGATTGACCTTTTACAAGCC TTCTCTCAACTTATCTGTACTTGTAATAGCCTGAAGACAAGCCCACCACCTGCAATTGCCACAACAATTG CCATGACCTTAGGAAATGACCTCCAGAGGTGTGGTCGCATCTCCAATCAGATGAAACAGTCCATGGAAGA ATTTCGAAGCCTTGCTTCTCGATATGGAGATCTTTACCAGGCATCTTTTGATGCTGACTCAGCAACTTTG AGGAATGTTGAACTACAGCAGCAGAGCTGTTTACTGATATCTCATGCAATAGAAGCCCTGATTTTGGATC CAGAATCAGCAAGTTTCCAGGAATATGGATCTACTGGAACAGCCCATGCTGATAGTGAATATGAAAGAAG AATGATGTCTGTATATAATCATGTCTTGGAGGAGGTAGAATCACTCAATCGGAAATATACCCCTGTTTCT TATATGAGATATTTTTTCCAGAAACTACAGTCTACCAGCATCAAGCTTGCTCTGTCACCATCGCCCCGGA ATCCTGCAGAGCCCATTGCTGTCCAGAATAACCAGCAGCTGGCGCTAAAGGTAGAGGGAGTGGTTCAGCA CGGATCTAAACCAGGACTCTTCCGCAAAATTCAGTCTGTCTGTCTGAATGTTTCTTCCACACTGCAGAGT AAATCTGGACAAGACTACAAGATACCCATTGACAACATGACCAATGAGATGGAGCAAAGGGTTGAACCTC ATAATGATTACTTCAGTACTCAATTTCTGTTGAACTTTGCTATCCTTGGAACACACAACATTACAGTGGA ATCTTCTGTGAAAGATGCCAATGGTATAGTATGGAAGACTGGTCCCAGAACTACCATATTTGTAAAATCC CTGGAAGACCCTTATTCCCAGCAAATTCGCTTACAACAGCAGCAAGCCCAGCAGCCATTACAGCAGCAGC AGCAACGCAATGCCTACACACGGTTTTAA
Translation (942 aa):
MASNSTKSFLADAGYGEQELDANSALMELDKGLRSGKLGEQCEAVVRFPRLFQKYPFPILINSAFLKLAD VFRVGNNFLRLCVLKVTQQSEKHLEKILNVDEFVKRIFSVIHSNDPVARAITLRMLGSLASIIPERKNAH HSIRQSLDSHDNVEVEAAVFAAANFSAQSKDFAVGICNKISEMIQGLATPVDLKLKLIPILQHMHHDAIL ASSARQLLQQLVTSYPSTKMVIVSLHTFTLLAASSLVDTPKQIQLLLQYLKNDPRKAVKRLAIQDLKLLA NKTPHTWSRENIQALCECALQTPYDSLKLGMLSVLSTLSGTIAIKHYFSIVPGNVSSSPRSSDLVKLAQE CCYHNNRGIAAHGVRVLTNITVSCQEKDLLALEQDAVFGLESLLVLCSQDDSPGAQATLKIALNCMVKLA KGRPHLSQSVVETLLTQLHSAQDAARILMCHCLAAIAMQLPVLGDGMLGDLMELYKVIGRSATDKQQELL VSLATVIFVASQKALSVESKAVIKQQLESVSNGWTVYRIARQASRMGNHDMAKELYQSLLTQVASEHFYF WLNSLKEFSHAEQCLTGLQEENYSSALSCIAESLKFYHKGIASLTAASTPLNPLSFQCEFVKLRIDLLQA FSQLICTCNSLKTSPPPAIATTIAMTLGNDLQRCGRISNQMKQSMEEFRSLASRYGDLYQASFDADSATL RNVELQQQSCLLISHAIEALILDPESASFQEYGSTGTAHADSEYERRMMSVYNHVLEEVESLNRKYTPVS YMRYFFQKLQSTSIKLALSPSPRNPAEPIAVQNNQQLALKVEGVVQHGSKPGLFRKIQSVCLNVSSTLQS KSGQDYKIPIDNMTNEMEQRVEPHNDYFSTQFLLNFAILGTHNITVESSVKDANGIVWKTGPRTTIFVKS LEDPYSQQIRLQQQQAQQPLQQQQQRNAYTRF

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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