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Report for CCDS55743.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55743.1 Public Homo sapiens 11 AKIP1 24 110 108 CCDS HistoryNCBI Gene:56672Re-query CCDS DB by CCDS ID:55743.1Re-query CCDS DB by GeneID:56672See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55743.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309357.8 ENSP00000310644.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000309357.8Link to Ensembl Protein Viewer:ENSP00000310644.4Re-query CCDS DB by Nucleotide ID:ENST00000309357Re-query CCDS DB by Protein ID:ENSP00000310644
Original member Current member NCBI NM_001206647.2 NP_001193576.1 Accepted alive Link to Nucleotide Sequence:NM_001206647.2Link to Protein Sequence:NP_001193576.1Re-query CCDS DB by Nucleotide ID:NM_001206647Re-query CCDS DB by Protein ID:NP_001193576Link to BLAST:NP_001193576.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001193576.1 183 Q9NQ31-2 183 100% 0 0

Chromosomal Locations for CCDS 55743.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 8911450 8911671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8912453 8912533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8914826 8914930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 8919337 8919480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (552 nt):
ATGGACAACTGTTTGGCGGCCGCAGCGCTGAATGGGGTGGACCGACGTTCCCTGCAGCGTTCAGCAAGGC
TGGCTCTAGAAGTGCTGGAGAGGGCCAAGAGGAGGGCGGTGGACTGGCATGCCCTGGAGCGTCCCAAAGG
CTGCATGGGGGTCCTTGCCCGGGAGGCGCCCCACCTAGAGAAACAGCCGGCAGCCGGCCCGCAGCGCGTT
CTCCCGGGAGAGAGAGAAGAGAGACCCCCAACCCTTAGTGCTTCCTTCAGAACAATGGCTGAATTCATGG
ACTATACTTCAAGTCAGTGTGGGAAATATTATTCATCTGTGCCAGAGGAAGGAGGGGCAACCCATGTCTA
TCGTTATCACAGAGGCGAGTCGAAGCTGCACATGTGCTTGGACATAGGGAATGGTCAGGCTGAGAACATC
TCTAAGGACCTCTACATAGAAGTATATCCAGGGACCTATTCTGTCACTGTGGGCTCAAATGACTTAACCA
AGAAGACTCATGTGGTAGCAGTTGATTCTGGACAAAGCGTGGACCTGGTCTTCCCTGTGTGA

Translation (183 aa):
MDNCLAAAALNGVDRRSLQRSARLALEVLERAKRRAVDWHALERPKGCMGVLAREAPHLEKQPAAGPQRV
LPGEREERPPTLSASFRTMAEFMDYTSSQCGKYYSSVPEEGGATHVYRYHRGESKLHMCLDIGNGQAENI
SKDLYIEVYPGTYSVTVGSNDLTKKTHVVAVDSGQSVDLVFPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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