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Report for CCDS55871.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55871.1 Public Homo sapiens 12 ANKS1B 24 110 108 CCDS HistoryNCBI Gene:56899Re-query CCDS DB by CCDS ID:55871.1Re-query CCDS DB by GeneID:56899See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55871.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000547446.5 ENSP00000450015.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000547446.5Link to Ensembl Protein Viewer:ENSP00000450015.1Re-query CCDS DB by Nucleotide ID:ENST00000547446Re-query CCDS DB by Protein ID:ENSP00000450015
Original member Current member NCBI NM_001204067.2 NP_001190996.1 Accepted alive Link to Nucleotide Sequence:NM_001204067.2Link to Protein Sequence:NP_001190996.1Re-query CCDS DB by Nucleotide ID:NM_001204067Re-query CCDS DB by Protein ID:NP_001190996Link to BLAST:NP_001190996.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001190996.1 394 Q7Z6G8-10 394 100% 0 0

Chromosomal Locations for CCDS 55871.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 98745739 98745846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98751355 98751522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98773042 98773179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98781117 98781203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98782126 98782137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98798934 98799005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98800997 98801125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98832029 98832136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99053157 99053309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99084925 99085023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99154289 99154395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99154970 99154973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1185 nt):
ATGGGACCCAGATGCCCTGTCCAAACAGTGGGACAATGGTTGGAAAGCATTGGGCTACCTCAGTACGAGA
ACCACCTGATGGCTAATGGATTTGACAATGTGCAGTTTATGGGAAGCAATGTTATGGAAGATCAGGATTT
GTTGGAAATTGGAATCCTTAATTCTGGGCACAGACAAAGAATTCTACAGGCAATCCAGCTCCTTCCAAAG
ATGAGACCCATTGGGCATGATGGCTACCATCCCACCTCTGTAGCTGAGTGGCTGGATTCCATTGAACTGG
GCGACTACACCAAAGCCTTTCTAATTAATGGCTACACTTCGATGGACCTGTTGAAAAAAATCTGGGAGGT
TGAACTTATTAATGTTTTAAAAATCAATTTGATTGGCCACAGGAAACGTATTTTGGCATCTCTGGGAGAC
AGGCTGCACGACGATCCCCCACAGAAGCCCCCTCGGTCCATCACCCTCAGGACAGGAGACTGGGGAGAAC
CTTCCATTACCTTGCGACCTCCGAATGAAGCCACAGCCTCTACCCCGGTACAGTACTGGCAGCATCACCC
AGAAAAGCTTATCTTCCAGTCGTGTGATTACAAAGCTTTTTATTTAGGTTCTATGCTGATAAAAGAGCTT
AGGGGGACAGAATCAACCCAAGATGCTTGTGCAAAAATGCGGGCTAACTGTCAGAAGTCTACAGAGCAAA
TGAAGAAGGTCCCTACTATTATTCTTTCTGTCTCATATAAAGGAGTCAAATTTATTGATGCAACAAATAA
GAACATAATTGCTGAGCATGAAATTCGTAATATCTCCTGTGCTGCCCAGGACCCAGAAGACCTCTCAACA
TTTGCCTATATCACAAAAGATTTGAAGTCTAATCACCACTACTGTCATGTGTTTACTGCCTTTGATGTGA
ATTTAGCCTATGAAATCATCCTAACCCTGGGACAGGCATTCGAAGTCGCTTACCAGCTAGCACTACAAGC
AAGAAAAGGGGGACACTCCTCCACACTTCCAGAAAGCTTTGAAAACAAACCCTCCAAACCCATCCCCAAG
CCCCGCGTTAGCATTCGCAAGTCCGTGATCGACCCATCTGAGCAAAAGACTCTGGCCAATCTACCGTGGA
TTGTGGAGCCGGGCCAAGAAGCCAAGAGGGGCATTAATACCAAGTATGAAACCACGATTTTCTGA

Translation (394 aa):
MGPRCPVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPK
MRPIGHDGYHPTSVAEWLDSIELGDYTKAFLINGYTSMDLLKKIWEVELINVLKINLIGHRKRILASLGD
RLHDDPPQKPPRSITLRTGDWGEPSITLRPPNEATASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKEL
RGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLST
FAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLALQARKGGHSSTLPESFENKPSKPIPK
PRVSIRKSVIDPSEQKTLANLPWIVEPGQEAKRGINTKYETTIF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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