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Report for CCDS55872.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55872.1 Public Homo sapiens 12 ANKS1B 24 110 108 CCDS HistoryNCBI Gene:56899Re-query CCDS DB by CCDS ID:55872.1Re-query CCDS DB by GeneID:56899See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55872.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000547776.6 ENSP00000449629.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000547776.6Link to Ensembl Protein Viewer:ENSP00000449629.2Re-query CCDS DB by Nucleotide ID:ENST00000547776Re-query CCDS DB by Protein ID:ENSP00000449629
Original member Current member NCBI NM_152788.4 NP_690001.3 Accepted alive Link to Nucleotide Sequence:NM_152788.4Link to Protein Sequence:NP_690001.3Re-query CCDS DB by Nucleotide ID:NM_152788Re-query CCDS DB by Protein ID:NP_690001Link to BLAST:NP_690001.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_690001.3 1248 Q7Z6G8-1 1248 100% 0 0

Chromosomal Locations for CCDS 55872.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 98735560 98735634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98751355 98751522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98773042 98773179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98781117 98781203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98782126 98782137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98798934 98799005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98800997 98801125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98829174 98829353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98832029 98832136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99053157 99053309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99084925 99085023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99154289 99154395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99244342 99244414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99246275 99246864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99399631 99399811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99443673 99443809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99504476 99504641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99655067 99655210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99772922 99773088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99775548 99775661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99779871 99779972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99782022 99782097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99806404 99806700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99812155 99812311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99825309 99825389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 99984104 99984237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3747 nt):
ATGGGGAAGGACCAGGAGCTGCTGGAAGCTGCTCGCACTGGAAATGTGGCTCTGGTGGAGAAACTCCTGT
CTGGCAGGAAAGGAGGGATCCTGGGCGGTGGATCCGGACCCCTGCCCCTGTCTAATCTGCTAAGCATCTG
GCGAGGCCCCAATGTGAACTGCACAGACAGTTCGGGTTACACTGCTTTACACCACGCAGCCTTAAATGGA
CATAAGGACATAGTTCTCAAACTACTTCAGTATGAGGCATCAACAAATGTAGCAGACAACAAAGGGTATT
TTCCTATTCACCTGGCTGCCTGGAAAGGAGATGTGGAAATTGTGAAGATTCTTATTCATCATGGACCATC
ACATTCCAGGGTCAATGAACAGAACAATGAAAATGAAACTGCCCTACACTGTGCAGCTCAATATGGACAC
TCAGAAGTAGTTGCTGTTCTCCTAGAAGAGCTCACTGACCCGACAATTAGAAATAGCAAGCTGGAAACAC
CTTTGGACTTGGCGGCACTCTACGGACGGCTTAGAGTGGTAAAAATGATCATCAGTGCACATCCTAACTT
AATGAGCTGCAACACTCGCAAGCACACGCCACTTCACCTTGCTGCGCGCAATGGCCACAAAGCAGTCGTG
CAGGTGCTGCTGGAGGCAGGAATGGATGTGAGCTGTCAAACAGAAAAGGGGAGTGCACTTCATGAAGCAG
CTTTGTTTGGAAAGGTGGATGTTGTACGAGTTCTGTTAGAAACAGGAATTGATGCCAACATAAAGGATAG
CTTAGGTAGAACTGTCTTGGACATTCTGAAAGAACATCCATCTCAGAAATCTCTCCAGATTGCAACACTC
TTACAAGAGTATTTAGAAGGCGTGGGAAGATCTACAGTCCTCGAAGAGCCTGTACAGGAAGATGCAACAC
AAGAAACACACATTTCATCTCCTGTTGAGTCTCCTTCCCAAAAGACCAAAAGTGAAACCGTCACTGGAGA
ATTATCAAAACTCTTGGATGAAATAAAACTCTGTCAAGAAAAGGATTATTCGTTTGAAGACTTGTGCCAC
ACAATATCAGACCACTACTTAGATAATTTGAGCAAGATTTCAGAGGAAGAACTTGGGAAAAATGGAAGCC
AGAGTGTAAGAACCTCATCTACAATCAATTTGTCACCAGGAGAAGTGGAAGAAGAGGATGATGATGAAAA
TACGTGTGGGCCATCAGGACTTTGGGAAGCATTAACTCCGTGTAATGGATGTAGGAACCTTGGCTTCCCC
ATGCTTGCCCAGGAGTCCTATCCAAAGAAGAGAAATTACACTATGGAAATTGTACCATCTGCTTCTCTGG
ATACATTTCCTTCAGAAAATGAGAACTTTCTGTGTGATCTCATGGACACAGCTGTTACAAAGAAACCTTG
CTCCTTAGAAATTGCAAGGGCACCTTCCCCAAGAACTGATAATGCCTCTGAGGTAGCAGTTACTACTCCA
GGAACTAGTAACCATAGAAACAGCTCAACAGGCCCAACACCTGATTGTTCACCTCCATCCCCTGATACTG
CCCTCAAAAATATTGTAAAAGTCATTCGACCCCAGCCTAAACAGCGAACATCCATTGTGTCTTCTCTGGA
TTTTCACCGAATGAATCACAACCAAGAATATTTTGAAATCAACACATCTACAGGGTGCACAAGCTTTACT
GCCAGTCCTCCTGCTAGTCCACCCACCTCTTCTGTGGGAACCACAGAAGTCAAGAATGAGGGAACTAACC
ATACAGATGACCTCTCCCGACAGGATGACAATGATCCCCCAAAAGAATATGATCCTGGGCAATTTGCAGG
CCTGCTCCATGGATCCTCTCCAGCCTGTGAGTCCCCTGAAAATCCATTTCATCTCTATGGGAAAAGAGAA
CAATGTGAAAAAGGACAAGATGAAGTCAGTTTGGCAAACAGTCCTTTGCCTTTCAAGCAGTCTCCAATAG
AAAATAACTCAGAACCTTTGGTAAAGAAAATTAAACCCAAAGTGGTCAGTAGAACAATTTTTCACAAAAA
AAGCAACCAACTCGAAAACCATACCATTGTTGGCACAAGATCAACCAGGAGTGGATCTCGGAATGGGGAC
CAGTGGGTTATGAACGCAGGGGGATTTGTGGAGAGAGCCTGTACTCTGGGGAGAATAAGGTCATTGCCTA
AAGCCTTGATCGACATGCATTTGTCAAAAAGTGTCTCTAAATCTGATTCTGATCTCATTGCCTATCCTTC
CAATGAGAAAACATCAAGAGTTAACTGGAGTGAATCTTCCACTGCTGAACACAGTTCTAAAGGGAATTCT
GAAAGAACACCATCCTTCACATCGGAATGGGAAGAAATTGACAAAATAATGAGTTCCATAGATGTTGGAA
TCAACAACGAACTTAAAGAGATGAATGGTGAGACCACAAGACCCAGATGCCCTGTCCAAACAGTGGGACA
ATGGTTGGAAAGCATTGGGCTACCTCAGTACGAGAACCACCTGATGGCTAATGGATTTGACAATGTGCAG
TTTATGGGAAGCAATGTTATGGAAGATCAGGATTTGTTGGAAATTGGAATCCTTAATTCTGGGCACAGAC
AAAGAATTCTACAGGCAATCCAGCTCCTTCCAAAGATGAGACCCATTGGGCATGATGGCTACCATCCCAC
CTCTGTAGCTGAGTGGCTGGATTCCATTGAACTGGGCGACTACACCAAAGCCTTTCTAATTAATGGCTAC
ACTTCGATGGACCTGTTGAAAAAAATCTGGGAGGTTGAACTTATTAATGTTTTAAAAATCAATTTGATTG
GCCACAGGAAACGTATTTTGGCATCTCTGGGAGACAGGCTGCACGACGATCCCCCACAGAAGCCCCCTCG
GTCCATCACCCTCAGGGAACCCAGTGGTAATCACACTCCTCCTCAGTTGTCTCCATCACTTAGCCAAAGC
ACTTACACCACTGGTGGCTCCCTAGACGTTCCTCACATTATCATGCAGGGCGATGCAAGGAGGAGAAGAA
ATGAAAACTACTTTGATGATATTCCCCGATCAAAACTGGAGAGGCAGATGGCTCAGACAGGAGACTGGGG
AGAACCTTCCATTACCTTGCGACCTCCGAATGAAGCCACAGCCTCTACCCCGGTACAGTACTGGCAGCAT
CACCCAGAAAAGCTTATCTTCCAGTCGTGTGATTACAAAGCTTTTTATTTAGGTTCTATGCTGATAAAAG
AGCTTAGGGGGACAGAATCAACCCAAGATGCTTGTGCAAAAATGCGGGCTAACTGTCAGAAGTCTACAGA
GCAAATGAAGAAGGTCCCTACTATTATTCTTTCTGTCTCATATAAAGGAGTCAAATTTATTGATGCAACA
AATAAGAACATAATTGCTGAGCATGAAATTCGTAATATCTCCTGTGCTGCCCAGGACCCAGAAGACCTCT
CAACATTTGCCTATATCACAAAAGATTTGAAGTCTAATCACCACTACTGTCATGTGTTTACTGCCTTTGA
TGTGAATTTAGCCTATGAAATCATCCTAACCCTGGGACAGGCATTCGAAGTCGCTTACCAGCTAGCACTA
CAAGCAAGAAAAGGGGGACACTCCTCCACACTTCCAGAAAGCTTTGAAAACAAACCCTCCAAACCCATCC
CCAAGCCCCGCGTTAGCATTCGCAAGTCCGTGGATCTTCTTCATGCCAGCCATACCGGGCAGGAACCATC
AGAGAGACACACTGAGGAGGCACTCAGAAAATTTTGA

Translation (1248 aa):
MGKDQELLEAARTGNVALVEKLLSGRKGGILGGGSGPLPLSNLLSIWRGPNVNCTDSSGYTALHHAALNG
HKDIVLKLLQYEASTNVADNKGYFPIHLAAWKGDVEIVKILIHHGPSHSRVNEQNNENETALHCAAQYGH
SEVVAVLLEELTDPTIRNSKLETPLDLAALYGRLRVVKMIISAHPNLMSCNTRKHTPLHLAARNGHKAVV
QVLLEAGMDVSCQTEKGSALHEAALFGKVDVVRVLLETGIDANIKDSLGRTVLDILKEHPSQKSLQIATL
LQEYLEGVGRSTVLEEPVQEDATQETHISSPVESPSQKTKSETVTGELSKLLDEIKLCQEKDYSFEDLCH
TISDHYLDNLSKISEEELGKNGSQSVRTSSTINLSPGEVEEEDDDENTCGPSGLWEALTPCNGCRNLGFP
MLAQESYPKKRNYTMEIVPSASLDTFPSENENFLCDLMDTAVTKKPCSLEIARAPSPRTDNASEVAVTTP
GTSNHRNSSTGPTPDCSPPSPDTALKNIVKVIRPQPKQRTSIVSSLDFHRMNHNQEYFEINTSTGCTSFT
ASPPASPPTSSVGTTEVKNEGTNHTDDLSRQDDNDPPKEYDPGQFAGLLHGSSPACESPENPFHLYGKRE
QCEKGQDEVSLANSPLPFKQSPIENNSEPLVKKIKPKVVSRTIFHKKSNQLENHTIVGTRSTRSGSRNGD
QWVMNAGGFVERACTLGRIRSLPKALIDMHLSKSVSKSDSDLIAYPSNEKTSRVNWSESSTAEHSSKGNS
ERTPSFTSEWEEIDKIMSSIDVGINNELKEMNGETTRPRCPVQTVGQWLESIGLPQYENHLMANGFDNVQ
FMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLDSIELGDYTKAFLINGY
TSMDLLKKIWEVELINVLKINLIGHRKRILASLGDRLHDDPPQKPPRSITLREPSGNHTPPQLSPSLSQS
TYTTGGSLDVPHIIMQGDARRRRNENYFDDIPRSKLERQMAQTGDWGEPSITLRPPNEATASTPVQYWQH
HPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGVKFIDAT
NKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEVAYQLAL
QARKGGHSSTLPESFENKPSKPIPKPRVSIRKSVDLLHASHTGQEPSERHTEEALRKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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