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Report for CCDS55921.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55921.2 Public Homo sapiens 14 CHURC1 24 110 108 CCDS HistoryNCBI Gene:91612Re-query CCDS DB by CCDS ID:55921.2Re-query CCDS DB by GeneID:91612See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 55921.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000549115.7 ENSP00000448050.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000549115.7Link to Ensembl Protein Viewer:ENSP00000448050.2Re-query CCDS DB by Nucleotide ID:ENST00000549115Re-query CCDS DB by Protein ID:ENSP00000448050
Original member Current member EBI ENST00000552002.7 ENSP00000450144.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000552002.7Link to Ensembl Protein Viewer:ENSP00000450144.2Re-query CCDS DB by Nucleotide ID:ENST00000552002Re-query CCDS DB by Protein ID:ENSP00000450144
Original member Current member NCBI NM_001386928.1 NP_001373857.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001386928.1Link to Protein Sequence:NP_001373857.1Re-query CCDS DB by Nucleotide ID:NM_001386928Re-query CCDS DB by Protein ID:NP_001373857Link to BLAST:NP_001373857.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001373857.1 112 Q8WUH1-4 112 100% 0 0

Chromosomal Locations for CCDS 55921.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 64914496 64914534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 64923991 64924126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 64926010 64926080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 64932138 64932230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (339 nt):
ATGTGTGGCGACTGTGTGGAGAAGGAATATCCCAACCGGGGTAATACCTGCCTGGAGAATGGATCTTTCT
TACTGAACTTTACAGGCTGTGCAGTGTGCAGTAAGCGGGATTTTATGCTGATCACAAACAAATCCTTGAA
AGAAGAAGATGGAGAAGAAATAGTTACCTATGATCATTTGTGTAAGAATTGTCATCATGTAATAGCCAGA
CATGAGTATACATTCAGTATCATGGATGAATTTCAGGAGTATACCATGCTGTGTCTGTTATGCGGCAAAG
CCGAAGATACTATCAGTATTCTCCCTGATGACCCCCGACAAATGACTCTCTTATTCTAA

Translation (112 aa):
MCGDCVEKEYPNRGNTCLENGSFLLNFTGCAVCSKRDFMLITNKSLKEEDGEEIVTYDHLCKNCHHVIAR
HEYTFSIMDEFQEYTMLCLLCGKAEDTISILPDDPRQMTLLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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