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Report for CCDS56020.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56020.1 Public Homo sapiens 17 DHRS7C 24 110 108 CCDS HistoryNCBI Gene:201140Re-query CCDS DB by CCDS ID:56020.1Re-query CCDS DB by GeneID:201140See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56020.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330255.9 ENSP00000327975.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000330255.9Link to Ensembl Protein Viewer:ENSP00000327975.4Re-query CCDS DB by Nucleotide ID:ENST00000330255Re-query CCDS DB by Protein ID:ENSP00000327975
Original member Current member NCBI NM_001220493.2 NP_001207422.1 Accepted alive Link to Nucleotide Sequence:NM_001220493.2Link to Protein Sequence:NP_001207422.1Re-query CCDS DB by Nucleotide ID:NM_001220493Re-query CCDS DB by Protein ID:NP_001207422Link to BLAST:NP_001207422.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001207422.1 312 A6NNS2-1 312 100% 0 0

Chromosomal Locations for CCDS 56020.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 9771488 9771696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9772767 9772922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9777193 9777285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9779825 9780038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9781482 9781594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9791131 9791284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGGAGTCATGGCCATGCTGATGCTCCCCCTGCTGCTGCTGGGAATCAGCGGCCTCCTCTTCATTTACC
AAGAGGTGTCCAGGCTGTGGTCAAAGTCAGCTGTGCAGAACAAAGTGGTGGTGATCACCGATGCCATCTC
AGGACTGGGCAAGGAGTGTGCTCGGGTGTTCCACACAGGTGGGGCAAGGCTGGTGCTGTGTGGAAAGAAC
TGGGAGAGGCTAGAGAACCTATATGATGCCTTGATCAGCGTGGCTGACCCCAGCAAGCAGACATTCACCC
CAAAGCTGGTCCTGTTGGACCTCTCAGACATCAGCTGTGTCCCAGATGTGGCAAAAGAAGTCCTGGATTG
CTATGGCTGTGTGGACATCCTCATCAACAATGCCAGTGTGAAGGTGAAGGGGCCTGCCCATAAGATTTCT
CTGGAGCTCGACAAAAAGATCATGGATGCCAATTACTTTGGCCCCATCACATTGACGAAAGCCCTGCTTC
CCAACATGATCTCCCGGAGAACAGGCCAAATCGTGTTAGTGAATAATATCCAAGGGAAGTTTGGAATCCC
GTTCCGTACGACTTACGCTGCCTCCAAGCACGCAGCCCTGGGCTTCTTTGACTGCCTCCGAGCCGAAGTG
GAGGAATACGATGTTGTCATCAGCACCGTGAGCCCGACTTTCATCCGGTCGTACCACGTGTATCCAGAGC
AAGGAAACTGGGAAGCTTCCATTTGGAAATTCTTTTTCAGGAAGCTGACCTACGGCGTGCACCCAGTAGA
GGTGGCGGAGGAGGTGATGCGCACCGTGCGGAGGAAGAAGCAAGAGGTGTTTATGGCCAACCCCATCCCC
AAGGCCGCCGTGTACGTCCGCACCTTCTTCCCGGAGTTCTTTTTCGCCGTGGTGGCCTGTGGGGTGAAGG
AGAAGCTCAATGTCCCGGAGGAGGGGTAA

Translation (312 aa):
MGVMAMLMLPLLLLGISGLLFIYQEVSRLWSKSAVQNKVVVITDAISGLGKECARVFHTGGARLVLCGKN
WERLENLYDALISVADPSKQTFTPKLVLLDLSDISCVPDVAKEVLDCYGCVDILINNASVKVKGPAHKIS
LELDKKIMDANYFGPITLTKALLPNMISRRTGQIVLVNNIQGKFGIPFRTTYAASKHAALGFFDCLRAEV
EEYDVVISTVSPTFIRSYHVYPEQGNWEASIWKFFFRKLTYGVHPVEVAEEVMRTVRRKKQEVFMANPIP
KAAVYVRTFFPEFFFAVVACGVKEKLNVPEEG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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