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Report for CCDS56155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56155.1 Public Homo sapiens 2 BZW1 24 110 108 CCDS HistoryNCBI Gene:9689Re-query CCDS DB by CCDS ID:56155.1Re-query CCDS DB by GeneID:9689See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56155.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000452790.6 ENSP00000394316.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000452790.6Link to Ensembl Protein Viewer:ENSP00000394316.2Re-query CCDS DB by Nucleotide ID:ENST00000452790Re-query CCDS DB by Protein ID:ENSP00000394316
Original member Current member NCBI NM_001207068.3 NP_001193997.1 Accepted alive Link to Nucleotide Sequence:NM_001207068.3Link to Protein Sequence:NP_001193997.1Re-query CCDS DB by Nucleotide ID:NM_001207068Re-query CCDS DB by Protein ID:NP_001193997Link to BLAST:NP_001193997.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001193997.1 451 Q7L1Q6-3 451 100% 0 0

Chromosomal Locations for CCDS 56155.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 200812408 200812493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200813208 200813281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200815341 200815517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200815667 200815761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200816325 200816390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200817106 200817241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200817974 200818083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200818223 200818393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200818755 200818901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200819982 200820120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200821183 200821305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200822147 200822178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1356 nt):
ATGTACGGGGCGCCTGGGGCCCCGGCGCAAAGCGCCTCAGTGACTGTGGTCCGCTCGTTGCGGCGGCCGC
CACCGCAGGCGACAGGGGTGTCTTTTATGAATAATCAAAAGCAGCAAAAGCCAACGCTATCAGGCCAGCG
TTTTAAAACTAGAAAAAGAGATGAAAAAGAGAGGTTTGACCCTACTCAGTTTCAAGACTGTATTATTCAA
GGCTTAACTGAAACCGGTACTGATTTGGAAGCAGTAGCTAAGTTTCTTGATGCTTCTGGAGCAAAACTTG
ATTACCGTCGATATGCAGAAACACTCTTTGACATTCTGGTGGCTGGTGGAATGCTGGCCCCAGGTGGTAC
ACTGGCAGATGACATGATGCGTACAGATGTCTGCGTGTTTGCAGCCCAAGAAGATCTAGAGACCATGCAA
GCATTTGCTCAGGTTTTTAACAAGTTAATCAGGCGCTACAAATACCTGGAGAAAGGTTTTGAAGATGAAG
TAAAAAAGCTGCTGCTGTTCTTGAAGGGTTTTTCAGAGTCGGAGAGGAACAAGCTAGCTATGTTGACTGG
TGTTCTTCTGGCTAATGGAACACTTAATGCATCCATTCTTAATAGCCTTTATAATGAAAATTTGGTTAAA
GAAGGAGTTTCAGCAGCTTTTGCTGTGAAGCTCTTTAAATCATGGATAAATGAAAAAGATATCAATGCAG
TAGCTGCAAGTCTTCGGAAAGTCAGCATGGATAACAGACTGATGGAACTCTTTCCTGCCAATAAGCAAAG
TGTTGAACACTTCACAAAATATTTTACTGAGGCAGGCTTGAAAGAGCTTTCAGAATATGTTCGGAATCAG
CAAACCATCGGAGCTCGTAAGGAGCTCCAGAAAGAACTTCAAGAACAGATGTCCCGTGGTGATCCATTTA
AGGATATAATTTTATATGTCAAGGAGGAGATGAAAAAAAACAACATCCCAGAGCCAGTTGTCATCGGAAT
AGTCTGGTCAAGTGTAATGAGCACTGTGGAATGGAACAAAAAAGAGGAGCTTGTAGCAGAGCAAGCCATC
AAGCACTTGAAGCAATACAGCCCTCTACTTGCTGCCTTTACTACTCAAGGTCAGTCTGAGCTGACTCTGT
TACTGAAGATTCAGGAGTATTGCTATGACAACATTCATTTCATGAAAGCCTTCCAGAAAATAGTGGTGCT
TTTTTATAAAGCTGAAGTCCTGAGCGAGGAGCCCATTTTGAAGTGGTATAAAGATGCACATGTTGCAAAG
GGGAAGAGTGTTTTCCTTGAGCAAATGAAAAAGTTTGTAGAATGGCTCAAAAATGCTGAAGAAGAATCTG
AATCTGAAGCTGAAGAAGGTGACTGA

Translation (451 aa):
MYGAPGAPAQSASVTVVRSLRRPPPQATGVSFMNNQKQQKPTLSGQRFKTRKRDEKERFDPTQFQDCIIQ
GLTETGTDLEAVAKFLDASGAKLDYRRYAETLFDILVAGGMLAPGGTLADDMMRTDVCVFAAQEDLETMQ
AFAQVFNKLIRRYKYLEKGFEDEVKKLLLFLKGFSESERNKLAMLTGVLLANGTLNASILNSLYNENLVK
EGVSAAFAVKLFKSWINEKDINAVAASLRKVSMDNRLMELFPANKQSVEHFTKYFTEAGLKELSEYVRNQ
QTIGARKELQKELQEQMSRGDPFKDIILYVKEEMKKNNIPEPVVIGIVWSSVMSTVEWNKKEELVAEQAI
KHLKQYSPLLAAFTTQGQSELTLLLKIQEYCYDNIHFMKAFQKIVVLFYKAEVLSEEPILKWYKDAHVAK
GKSVFLEQMKKFVEWLKNAEEESESEAEEGD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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