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Report for CCDS56356.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56356.1 Public Homo sapiens 5 NPR3 24 110 108 CCDS HistoryNCBI Gene:4883Re-query CCDS DB by CCDS ID:56356.1Re-query CCDS DB by GeneID:4883See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 56356.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000326958.5 ENSP00000318340.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000326958.5Link to Ensembl Protein Viewer:ENSP00000318340.2Re-query CCDS DB by Nucleotide ID:ENST00000326958Re-query CCDS DB by Protein ID:ENSP00000318340
Original member Current member NCBI NM_001204376.2 NP_001191305.1 Accepted alive Link to Nucleotide Sequence:NM_001204376.2Link to Protein Sequence:NP_001191305.1Re-query CCDS DB by Nucleotide ID:NM_001204376Re-query CCDS DB by Protein ID:NP_001191305Link to BLAST:NP_001191305.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191305.1 324 P17342-3 324 100% 0 0

Chromosomal Locations for CCDS 56356.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 32710663 32710783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 32724698 32724820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 32738864 32739030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 32774708 32774843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 32780722 32780816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 32782893 32783028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 32784799 32784883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 32786234 32786345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (975 nt):
ATGGAGCCATCTGCACTGGGACCTTGGTCCTTGTTCCCTGACCTTGCGCCGAGGGACCAGGAAGGTCAGG
TGCTCGCCCCGCGTCGGTGCTTCAGGAGGGAATGTGGCCAGAACGAGAAAGTGGTGATCATGTGTGCGAG
CAGTGACACCATCCGGAGCATCATGCTGGTGGCGCACAGGCATGGCATGACCAGTGGAGACTACGCCTTC
TTCAACATTGAGCTCTTCAACAGCTCTTCCTATGGAGATGGCTCATGGAAGAGAGGAGACAAACACGACT
TTGAAGCTAAGCAAGCATACTCGTCCCTCCAGACAGTCACTCTACTGAGGACAGTGAAACCTGAGTTTGA
GAAGTTTTCCATGGAGGTGAAAAGTTCAGTTGAGAAACAAGGGCTCAATATGGAGGATTACGTTAACATG
TTTGTTGAAGGATTCCACGATGCCATCCTCCTCTACGTCTTGGCTCTACATGAAGTACTCAGAGCTGGTT
ACAGCAAAAAGGATGGAGGGAAAATTATACAGCAGACTTGGAACAGAACATTTGAAGGTATCGCCGGGCA
GGTGTCCATAGATGCCAACGGAGACCGATATGGGGATTTCTCTGTGATTGCCATGACTGATGTGGAGGCG
GGCACCCAGGAGGTTATTGGTGATTATTTTGGAAAAGAAGGTCGTTTTGAAATGCGGCCGAATGTCAAAT
ATCCTTGGGGCCCTTTAAAACTGAGAATAGATGAAAACCGAATTGTAGAGCATACAAACAGCTCTCCCTG
CAAATCATGTGGCCTAGAAGAATCGGCAGTGACAGGAATTGTCGTGGGGGCTTTACTAGGAGCTGGCTTG
CTAATGGCCTTCTACTTTTTCAGGAAGAAATACAGAATAACCATTGAGAGGCGAACCCAGCAAGAAGAAA
GTAACCTTGGAAAACATCGGGAATTACGGGAAGATTCCATCAGATCCCATTTTTCAGTAGCTTAA

Translation (324 aa):
MEPSALGPWSLFPDLAPRDQEGQVLAPRRCFRRECGQNEKVVIMCASSDTIRSIMLVAHRHGMTSGDYAF
FNIELFNSSSYGDGSWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNM
FVEGFHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIAMTDVEA
GTQEVIGDYFGKEGRFEMRPNVKYPWGPLKLRIDENRIVEHTNSSPCKSCGLEESAVTGIVVGALLGAGL
LMAFYFFRKKYRITIERRTQQEESNLGKHRELREDSIRSHFSVA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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