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Report for CCDS56510.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56510.1 Public Homo sapiens 7 CCDC136 24 110 108 CCDS HistoryNCBI Gene:64753Re-query CCDS DB by CCDS ID:56510.1Re-query CCDS DB by GeneID:64753See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56510.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378685.8 ENSP00000367956.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378685.8Link to Ensembl Protein Viewer:ENSP00000367956.4Re-query CCDS DB by Nucleotide ID:ENST00000378685Re-query CCDS DB by Protein ID:ENSP00000367956
Original member Current member NCBI NM_001201372.2 NP_001188301.1 Accepted alive Link to Nucleotide Sequence:NM_001201372.2Link to Protein Sequence:NP_001188301.1Re-query CCDS DB by Nucleotide ID:NM_001201372Re-query CCDS DB by Protein ID:NP_001188301Link to BLAST:NP_001188301.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001188301.1 434 Q96JN2-3 434 100% 0 0

Chromosomal Locations for CCDS 56510.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 128791494 128791551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128792320 128792427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128794348 128794602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128794694 128794768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128801186 128801473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128804650 128804761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128805359 128805524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128805761 128805901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128817758 128817859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1305 nt):
ATGGAGGCGGGCGCCGGAGCCGGCGCGGGAGCCGCGGGCTGGAGCTGCCCGGGCCCAGGACCCACAGTGA
CCACTCTAGGCTCCTATGAGGCTTCCGAGGGCTGTGAGAGGAAGAAGGGCCAACGCTGGGGGTCCCTGGA
ACGACGGGGGATGCAAGCTATGGAGGGGGAGGTGTTACTCCCAGCTCTCTATGAGGAGGAAGAGGAAGAG
GAAGAGGAGGAAGAAGAGGTGGAAGAAGAAGAAGAACAAGTGCAGAAAGGTGGCAGTGTTGGCTCTCTGT
CAGTCAACAAGCACCGGGGACTGAGCCTCACGGAGACAGAGCTGGAGGAGCTGCGGGCTCAGGTGCTGCA
GCTGGTGGCAGAACTGGAGGAGACCCGGGAACTGGCAGGGCAGCATGAGGATGACTCCTTGGAGCTACAG
GGGCTCCTGGAGGATGAACGGCTAGCCAGCGCCCAGCAGGCAGAGGTGTTCACCAAGCAGATCCAGCAGC
TCCAAGGTGAGCTGCGTTCTCTACGGGAGGAGATTTCCCTGTTAGAGCATGAGAAAGAAAGCGAACTTAA
GGAAATAGAACAGGAATTGCATTTGGCCCAGGCTGAGATCCAGAGTCTGCGGCAAGCAGCAGAGGATTCC
GCAACTGAACATGAGAGTGACATAGCATCCCTGCAGGAGGATCTCTGCCGGATGCAGAATGAACTTGAAG
ACATGGAACGCATTCGGGGAGATTATGAGATGGAGATCGCCTCCCTCCGTGCAGAAATGGAAATGAAGAG
CTCTGAACCATCCGAAGAACTGCAGGAGCTGCGGGAACGCTACCATTTCCTGAATGAGGAATACCGGGCC
CTGCAGGAGAGCAACAGCAGCCTCACGGGGCAGCTTGCAGATCTGGAGAGTGAGAGGACACAGAGAGCAA
CAGAGAGATGGCTGCAGTCCCAAACACTGAGTATGACGTCAGCAGAGTCTCAGACTTCAGAAATGGATTT
CTTAGAGCCTGATCCTGAAATGCAGTTGTTACGGCAGCAGCTACGGGATGCTGAAGAGCAGATGCATGGC
ATGAAGAACAAGTGTCAGGAATTGTGTTGTGAGTTGGAAGAGCTACAGCATCATCGCCAGGTCAGTGAGG
AGGAGCAGAGGCGGCTGCAGAGGGAGCTCAAGTGTGCTCAGAATGAGGTGCTTCGGTTTCAGACCTCCCA
CAGTGTCACCCAGTCATCCCCTACCCCCAATCCCCCCATCTTCTCCTTGCCTCTTGTAGGCCTGGTGGTC
ATCTCGGCTTTGCTCTGGTGCTGGTGGGCTGAGACGTCGTCCTAA

Translation (434 aa):
MEAGAGAGAGAAGWSCPGPGPTVTTLGSYEASEGCERKKGQRWGSLERRGMQAMEGEVLLPALYEEEEEE
EEEEEEVEEEEEQVQKGGSVGSLSVNKHRGLSLTETELEELRAQVLQLVAELEETRELAGQHEDDSLELQ
GLLEDERLASAQQAEVFTKQIQQLQGELRSLREEISLLEHEKESELKEIEQELHLAQAEIQSLRQAAEDS
ATEHESDIASLQEDLCRMQNELEDMERIRGDYEMEIASLRAEMEMKSSEPSEELQELRERYHFLNEEYRA
LQESNSSLTGQLADLESERTQRATERWLQSQTLSMTSAESQTSEMDFLEPDPEMQLLRQQLRDAEEQMHG
MKNKCQELCCELEELQHHRQVSEEEQRRLQRELKCAQNEVLRFQTSHSVTQSSPTPNPPIFSLPLVGLVV
ISALLWCWWAETSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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